RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 TSPAN11A1L157 253 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 KDM4EB2RXH2 506 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 C5orf58C9J3I9 102 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 GSTZ1O43708 216 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 RAD1O60671 282 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 CSF2RBP32927 897 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 SORDQ00796 357 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 MEF2AQ02078 507 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 EIF2S3LQ2VIR3 472 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 HNRNPA1L2Q32P51 320 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 HEPHL1Q6MZM0 1159 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 REEP3Q6NUK4 255 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 KIAA1211LQ6NV74 962 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 ARL9Q6T311 187 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 UQCC3Q6UW78 93 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 FAM122BQ7Z309 247 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 CAMKMTQ7Z624 323 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 SMARCD2Q92925 531 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 RAD51AP1Q96B01 352 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 DTD2Q96FN9 168 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 PCDHB10Q9UN67 800 aa12.98□□□□□ -0.33
GTF3C1-203ENST00000562609 A0A1B0GV90 55 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 F5H5P2 479 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 GBAP04062 536 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 BCHEP06276 602 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 UBBP0CG47 229 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 UBCP0CG48 685 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 ADRB3P13945 408 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 TBXA2RP21731 343 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 NFYBP25208 207 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 IMPA1P29218 277 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 P2RY4P51582 365 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 RPS27AP62979 156 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 UBA52P62987 128 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 LINC00303Q3SY05 128 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 DCAF12L2Q5VW00 463 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 WDSUB1Q8N9V3 476 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 OR1S2Q8NGQ3 325 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 ZDHHC12Q96GR4 267 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 FCRL4Q96PJ5 515 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 TLNRD1Q9H1K6 362 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 KLHL42Q9P2K6 505 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 SH2B3Q9UQQ2 575 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 SNRPGP15A8MWD9 76 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 ITGA10O75578 1167 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 PRNPP04156 253 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 GCGRP47871 477 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 PRLHRP49683 370 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 RNF144AP50876 292 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 ACTR1AP61163 376 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 RPS26P62854 115 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 RNF212Q495C1 297 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 SYT9Q86SS6 491 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 LNX2Q8N448 690 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 GTF3AQ92664 365 aaKnown RBP12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 MAP3K3Q99759 626 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 TCEAL7Q9BRU2 100 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 SLC38A1Q9H2H9 487 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF629Q9UEG4 869 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 PLAGL1Q9UM63 463 aa12.97□□□□□ -0.33
GTF3C1-203ENST00000562609 SLC5A10A0PJK1 596 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 GOSR2O14653 212 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 GPR37O15354 613 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 PAK4O96013 591 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 RPA2P15927 270 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 MGMTP16455 207 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 ATF1P18846 271 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 ART1P52961 327 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 DEFA6Q01524 100 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 FABP9Q0Z7S8 132 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 ELFN2Q5R3F8 820 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 ZNF547Q8IVP9 402 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 GOT1L1Q8NHS2 421 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 OR8D1Q8WZ84 308 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 NEIL2Q969S2 332 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 NUS1Q96E22 293 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 FAM83CQ9BQN1 747 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 UFSP2Q9NUQ7 469 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 SLC27A6Q9Y2P4 619 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 CKAP5Q14008 2032 aa12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 KIF26AQ9ULI4 1882 aaPredicted RBP12.96□□□□□ -0.33
GTF3C1-203ENST00000562609 SAP18O00422 153 aaKnown RBP12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 NPC1O15118 1278 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 EIF4E2O60573 245 aaKnown RBP12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 KHDRBS3O75525 346 aaKnown RBP12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 CATP04040 527 aaKnown RBP12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 ACP5P13686 325 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 BDKRB2P30411 391 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 MC1RQ01726 317 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 SHHQ15465 462 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 NDUFA9Q16795 377 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 CDC73Q6P1J9 531 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 BEND4Q6ZU67 534 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 TMPRSS11BQ86T26 416 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 SKA3Q8IX90 412 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 DMRTC2Q8IXT2 367 aaPredicted RBP12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 BBS1Q8NFJ9 593 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 OR52I2Q8NH67 350 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 RFKQ969G6 155 aa12.96□□□□□ -0.34
GTF3C1-203ENST00000562609 TIFAQ96CG3 184 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms