RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 CAP1Q01518 475 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 DEFA6Q01524 100 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 TMEM44Q2T9K0 475 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 RNF212Q495C1 297 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 OR2B11Q5JQS5 317 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 FAM102AQ5T9C2 384 aaPredicted RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 HIST2H2AA3Q6FI13 130 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 TRNP1Q6NT89 227 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 TMEM173Q86WV6 379 aaPredicted RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 ZDHHC23Q8IYP9 409 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 FTMTQ8N4E7 242 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 GPRC5AQ8NFJ5 357 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 SCARB1Q8WTV0 552 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 PKMYT1Q99640 499 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 WDR77Q9BQA1 342 aaPredicted RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 SNRNP25Q9BV90 132 aaKnown RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 OR51J1Q9H342 316 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 TUBB1Q9H4B7 451 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 RLIMQ9NVW2 624 aa6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 AAR2Q9Y312 384 aaKnown RBP6.21□□□□□ -1.42
TSPAN3-209ENST00000560715 SUPT3HB4E1H0 165 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 GPR171O14626 319 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 SNAPC5O75971 98 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 RGS11O94810 467 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 LINC00032P0C843 101 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 HOXB8P17481 243 aaPredicted RBP6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 ATP5A1P25705 553 aaKnown RBP6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 LCN1P31025 176 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 MATKP42679 507 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 PTGFRP43088 359 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 CRYBB2P43320 205 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 INPP1P49441 399 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 VSX2P58304 361 aaPredicted RBP6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 SSX2Q16385 188 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 CDO1Q16878 200 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 SPDYE7PQ495Y7 208 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 TIGD5Q53EQ6 642 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 UNC50Q53HI1 259 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 C19orf54Q5BKX5 351 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 CERCAMQ5T4B2 595 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 SCYL2Q6P3W7 929 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 HAGHLQ6PII5 290 aaPredicted RBP6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 SSX9Q7RTT3 188 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 TRIM69Q86WT6 500 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 ZFAND4Q86XD8 727 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 RNF149Q8NC42 400 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 COQ8AQ8NI60 647 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 ADAMTS14Q8WXS8 1223 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 PFDN5Q99471 154 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 GABARAPL3Q9BY60 117 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 GSDMCQ9BYG8 508 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 C11orf49Q9H6J7 331 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 HHATLQ9HCP6 504 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 ZCCHC3Q9NUD5 404 aaKnown RBP6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 AHSPQ9NZD4 102 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 IKZF3Q9UKT9 509 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 NEUROG3Q9Y4Z2 214 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 HYKKA2RU49 373 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 ANKRD66B4E2M5 251 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 G3V3Q6 166 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 PSPNO60542 156 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 SDC3O75056 442 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 AP2A1O95782 977 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 CHRM5P08912 532 aaPredicted RBP6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 ZDHHC11BP0C7U3 371 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 SULT1A3P0DMM9 295 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 SULT1A4P0DMN0 295 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 COX5BP10606 129 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 ENGP17813 658 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 PSMA1P25786 263 aaKnown RBP6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 DDX6P26196 483 aaKnown RBP eCLIP6.2□□□□□ -1.422e-10■■□□□ 13.4
TSPAN3-209ENST00000560715 NMBRP28336 390 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 OR1D2P34982 312 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 GGT2P36268 569 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 SLC6A12P48065 614 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 XKP51811 444 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 FOXA1P55317 472 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 TAS2R39P59534 338 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 HNRNPA0Q13151 305 aaKnown RBP6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 ATP6AP1LQ52LC2 224 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 FAM74A1Q5RGS3 127 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 AVPI1Q5T686 147 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 B3GNTL1Q67FW5 361 aaPredicted RBP6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 TXNDC8Q6A555 127 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 OR2T5Q6IEZ7 315 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 FAHD1Q6P587 224 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 MPZL3Q6UWV2 235 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 WASH2PQ6VEQ5 465 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 PGAP1Q75T13 922 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 SLC35F3Q8IY50 421 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 CRYBG2Q8N1P7 616 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 C1orf52Q8N6N3 182 aaKnown RBP6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 WDSUB1Q8N9V3 476 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 DNAAF3Q8N9W5 541 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 OR5B17Q8NGF7 314 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 OR2T29Q8NH02 315 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 OR1S1Q8NH92 325 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 NR4A3Q92570 626 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 AP3S1Q92572 193 aa6.2□□□□□ -1.42
TSPAN3-209ENST00000560715 CPNE4Q96A23 557 aaPredicted RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms