RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 CCL27Q9Y4X3 112 aa15.52■□□□□ 0.08
TSPAN3-208ENST00000560514 MEGF8Q7Z7M0 2845 aa15.52■□□□□ 0.07
TSPAN3-208ENST00000560514 TMEM89A2RUT3 159 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 ESPNB1AK53 854 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 B4DSR2 109 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 NPIPB9F8W1W9 429 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 KLF11O14901 512 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 UBTFL6P0CB48 400 aaPredicted RBP15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 SDC1P18827 310 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 PAX7P23759 505 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 FKBP2P26885 142 aaKnown RBP15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 HPCAL1P37235 193 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 ASMTP46597 345 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 RPL38P63173 70 aaKnown RBP15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 SKP2Q13309 424 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 PDE7AQ13946 482 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 CCNIQ14094 377 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 GPR68Q15743 365 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 EFNB3Q15768 340 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 ADIPOQQ15848 244 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 LIPMQ5VYY2 423 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 DEF8Q6ZN54 512 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 ABHD12BQ7Z5M8 362 aaPredicted RBP15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 WDR60Q8WVS4 1066 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 SLC38A2Q96QD8 506 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 KATNB1Q9BVA0 655 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 RBM4Q9BWF3 364 aaKnown RBP15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 OBP2BQ9NPH6 170 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 SIRT3Q9NTG7 399 aaPredicted RBP15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 BAIAP2L1Q9UHR4 511 aa15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 NUP214P35658 2090 aaPredicted RBP15.51■□□□□ 0.07
TSPAN3-208ENST00000560514 COPEO14579 308 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 RGS9O75916 674 aaPredicted RBP15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 KRT33AO76009 404 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 UBE2NP61088 152 aaKnown RBP15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 TSPO2Q5TGU0 170 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 ZNF786Q8N393 782 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 FAM216AQ8WUB2 273 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 ARL5BQ96KC2 179 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 JMJD8Q96S16 334 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 NAA11Q9BSU3 229 aaPredicted RBP15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 NMUR2Q9GZQ4 415 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 DYNLRB1Q9NP97 96 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 CTPS2Q9NRF8 586 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 PCDHB10Q9UN67 800 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 GRIP1Q9Y3R0 1128 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 KCNE3Q9Y6H6 103 aa15.5■□□□□ 0.07
TSPAN3-208ENST00000560514 IGHV1-18A0A0C4DH31 117 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 EIF1BO60739 113 aaKnown RBP15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 TRIM13O60858 407 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 SHBGP04278 402 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 FGF4P08620 206 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 NEFHP12036 1026 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 KRT4P19013 534 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 RPL3P39023 403 aaKnown RBP15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 CLK1P49759 484 aaKnown RBP15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 HIKESHIQ53FT3 197 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 EIF3MQ7L2H7 374 aaKnown RBP15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 UBASH3BQ8TF42 649 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 UBLCP1Q8WVY7 318 aaPredicted RBP15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 MOAP1Q96BY2 351 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 OR7D2Q96RA2 312 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 SDF2Q99470 211 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 TMEM181Q9P2C4 612 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 TRAPPC4Q9Y296 219 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 TMED5Q9Y3A6 229 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 FLVCR1Q9Y5Y0 555 aa15.49■□□□□ 0.07
TSPAN3-208ENST00000560514 hCG_2039718K7EN88 272 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 DNAJA2O60884 412 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 SLC35A1P78382 337 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 TRIP10Q15642 601 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 LSM12Q3MHD2 195 aaKnown RBP15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 CLEC6AQ6EIG7 209 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 GRINAQ7Z429 371 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 PEG10Q86TG7 708 aaKnown RBP15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 CCDC63Q8NA47 563 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 POMGNT2Q8NAT1 580 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 OR4F15Q8NGB8 312 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 OR5P2Q8WZ92 322 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 TRIM44Q96DX7 344 aaPredicted RBP15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 FCRL1Q96LA6 429 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 CCDC106Q9BWC9 280 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 GPATCH2Q9NW75 528 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 TMEM45AQ9NWC5 275 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 FIS1Q9Y3D6 152 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 PTGDR2Q9Y5Y4 395 aa15.48■□□□□ 0.07
TSPAN3-208ENST00000560514 SH3PXD2BA1X283 911 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 DUXAA6NLW8 204 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 AZIN1O14977 448 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 CFLARO15519 480 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 STX11O75558 287 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 SKAP2O75563 359 aaPredicted RBP15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 CHEK2O96017 543 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 AK1P00568 194 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 CCNA2P20248 432 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 RYKP34925 604 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 LIMS1P48059 325 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 ZNF141Q15928 474 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 ADRM1Q16186 407 aa15.47■□□□□ 0.07
TSPAN3-208ENST00000560514 GALNTL6Q49A17 601 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms