RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 SLC16A1P53985 500 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 PRKAA2P54646 552 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 RPL38P63173 70 aaKnown RBP9.35□□□□□ -0.91
TRAF3-207ENST00000559734 NAAAQ02083 359 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 SKP2Q13309 424 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 GPR68Q15743 365 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 EXOSC6Q5RKV6 272 aaKnown RBP9.35□□□□□ -0.91
TRAF3-207ENST00000559734 SHISA2Q6UWI4 295 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 TREML4Q6UXN2 200 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 TIFABQ6ZNK6 161 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 TRMT10CQ7L0Y3 403 aaKnown RBP9.35□□□□□ -0.91
TRAF3-207ENST00000559734 SLC22A9Q8IVM8 553 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 IFT20Q8IY31 132 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 CLDND2Q8NHS1 167 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 KATNB1Q9BVA0 655 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 ACTRT3Q9BYD9 372 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 LAT2Q9GZY6 243 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 GSTO2Q9H4Y5 243 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 SEC61A2Q9H9S3 476 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 ACSS1Q9NUB1 689 aaPredicted RBP9.35□□□□□ -0.91
TRAF3-207ENST00000559734 ACER3Q9NUN7 267 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 PARPBPQ9NWS1 579 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 CHRNA9Q9UGM1 479 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 BAIAP2L1Q9UHR4 511 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 FIS1Q9Y3D6 152 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 SPEF1Q9Y4P9 236 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 FLVCR1Q9Y5Y0 555 aa9.35□□□□□ -0.91
TRAF3-207ENST00000559734 HEATR1Q9H583 2144 aaKnown RBP9.35□□□□□ -0.91
TRAF3-207ENST00000559734 TENM1Q9UKZ4 2725 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 LOC105371242A0A075B767 164 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 CENPVL1A0A0U1RR11 272 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 VSTM5A8MXK1 200 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 NPIPB9F8W1W9 429 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 ETV2O00321 342 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-207ENST00000559734 RIPK2O43353 540 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 LGI1O95970 557 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 KRT16P08779 473 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 ADRA2AP08913 450 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 CECR9P0C854 216 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 SAGP10523 405 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-207ENST00000559734 SDC1P18827 310 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 NPR2P20594 1047 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 RYKP34925 604 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 THBS4P35443 961 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 FRKP42685 505 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-207ENST00000559734 GPR6P46095 362 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-207ENST00000559734 RIN1Q13671 783 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 TBRG1Q3YBR2 411 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 OLIG3Q7RTU3 272 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 AAED1Q7RTV5 226 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 TRIM46Q7Z4K8 759 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 HOMEZQ8IX15 550 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 CDK20Q8IZL9 346 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 OR5D16Q8NGK9 328 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 OR51F2Q8NH61 342 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 MRPL24Q96A35 216 aaKnown RBP9.34□□□□□ -0.91
TRAF3-207ENST00000559734 L3HYPDHQ96EM0 354 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 CCT7Q99832 543 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 SLC6A7Q99884 636 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 ZNF747Q9BV97 191 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 SUCNR1Q9BXA5 334 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 C1orf109Q9NX04 203 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 TREM2Q9NZC2 230 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 FBXO9Q9UK97 447 aaPredicted RBP9.34□□□□□ -0.91
TRAF3-207ENST00000559734 HDGFL3Q9Y3E1 203 aa9.34□□□□□ -0.91
TRAF3-207ENST00000559734 A0A096LPE4 126 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 A0A1W2PPZ6 126 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 OR6C65A6NJZ3 312 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 NR5A2O00482 541 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 PNPP00491 289 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 NUDT7P0C024 238 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 FAM153BP0C7A2 387 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 SOAT1P35610 550 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 APOBEC1P41238 236 aaKnown RBP9.33□□□□□ -0.92
TRAF3-207ENST00000559734 CCT3P49368 545 aaKnown RBP9.33□□□□□ -0.92
TRAF3-207ENST00000559734 ARFIP2P53365 341 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 RPS26P62854 115 aaKnown RBP9.33□□□□□ -0.92
TRAF3-207ENST00000559734 PDE7AQ13946 482 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 KIAA0040Q15053 153 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 FAM153CQ494X1 144 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 CLEC6AQ6EIG7 209 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 ANKRD16Q6P6B7 361 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 USP43Q70EL4 1123 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 LCA5Q86VQ0 697 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 CARM1Q86X55 608 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 BPIFB2Q8N4F0 458 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 OR4F15Q8NGB8 312 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 OR56A1Q8NGH5 318 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 OR1K1Q8NGR3 316 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 OR5AK3PQ8NH89 298 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 CKAP2Q8WWK9 683 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 ZDHHC16Q969W1 377 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 AURKBQ96GD4 344 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-207ENST00000559734 ZNF764Q96H86 408 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-207ENST00000559734 ALKBH3Q96Q83 286 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-207ENST00000559734 OR7D2Q96RA2 312 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 DOK1Q99704 481 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 RHOXF2Q9BQY4 288 aa9.33□□□□□ -0.92
TRAF3-207ENST00000559734 NAA11Q9BSU3 229 aaPredicted RBP9.33□□□□□ -0.92
TRAF3-207ENST00000559734 CCDC106Q9BWC9 280 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms