RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 OR11A1Q9GZK7 315 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 TRAPPC4Q9Y296 219 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 SLC9A8Q9Y2E8 581 aa11.49□□□□□ -0.57
TPM1-220ENST00000559556 PKD1L1Q8TDX9 2849 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 A0A1W2PR80 420 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 M0R1B8 84 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 F12P00748 615 aaPredicted RBP11.48□□□□□ -0.57
TPM1-220ENST00000559556 BPGMP07738 259 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 CSF3P09919 207 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 OR12D1P0DN82 309 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 UQCRC2P22695 453 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 RYKP34925 604 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 MAGEA8P43361 318 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 HTR3AP46098 478 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 KHKP50053 298 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 FABP6P51161 128 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 SLC25A3Q00325 362 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 SAXO2Q658L1 398 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 TNFAIP8L2Q6P589 184 aaPredicted RBP11.48□□□□□ -0.57
TPM1-220ENST00000559556 CASP12Q6UXS9 341 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 CCDC103Q8IW40 242 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 C17orf78Q8N4C9 275 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 ARFGAP2Q8N6H7 521 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 WDR31Q8NA23 367 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 XAGE5Q8WWM1 108 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 HTRA1Q92743 480 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 PROX1Q92786 737 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 RAB8BQ92930 207 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 TESCQ96BS2 214 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 NEURL3Q96EH8 262 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 DNAJA3Q96EY1 480 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 FKRPQ9H9S5 495 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 SLC17A5Q9NRA2 495 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 TMEM181Q9P2C4 612 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 LPAR3Q9UBY5 353 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 PCDHGB4Q9UN71 923 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 AMDHD2Q9Y303 409 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 FLVCR1Q9Y5Y0 555 aa11.48□□□□□ -0.57
TPM1-220ENST00000559556 TMED7-TICAM2A0A0A6YYA0 188 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 PRSS51A0A1B0GVH4 220 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 EIF1BO60739 113 aaKnown RBP11.47□□□□□ -0.57
TPM1-220ENST00000559556 ZNF16P17020 682 aaPredicted RBP11.47□□□□□ -0.57
TPM1-220ENST00000559556 ETV4P43268 484 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 EFNA4P52798 201 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 PHC1P78364 1004 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 KCNJ10P78508 379 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 CASP8Q14790 479 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 DPY19L1Q2PZI1 675 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 ANKRD46Q86W74 232 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 OR52E4Q8NGH9 312 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 ZG16BQ96DA0 208 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 KCNK17Q96T54 332 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 DPY30Q9C005 99 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 MANSC1Q9H8J5 431 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 AKTIPQ9H8T0 292 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 SLC7A10Q9NS82 523 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.47□□□□□ -0.57
TPM1-220ENST00000559556 PARPBPQ9NWS1 579 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 TMED7Q9Y3B3 224 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 DOCK11Q5JSL3 2073 aa11.47□□□□□ -0.57
TPM1-220ENST00000559556 PRAMEF27A3QJZ7 478 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 CLDN24A6NM45 220 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 HMGN4O00479 90 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 FAAHO00519 579 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 AP3D1O14617 1153 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 ZNF208O43345 1280 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 TYROBPO43914 113 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 IGHV4-31P0DP07 118 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 IMPDH2P12268 514 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 BMP4P12644 408 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 CREB1P16220 341 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 RPS4Y1P22090 263 aaKnown RBP11.46□□□□□ -0.57
TPM1-220ENST00000559556 APOBEC3AP31941 199 aaPredicted RBP11.46□□□□□ -0.57
TPM1-220ENST00000559556 THBS2P35442 1172 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 IDH2P48735 452 aaKnown RBP11.46□□□□□ -0.57
TPM1-220ENST00000559556 POLR2HP52434 150 aaKnown RBP11.46□□□□□ -0.57
TPM1-220ENST00000559556 MAP2K6P52564 334 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 OR2B6P58173 313 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 SLC35A1P78382 337 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 HPCAP84074 193 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 TGFBR3Q03167 851 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 CHRNB3Q05901 458 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 SLC17A1Q14916 467 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 PDCD2Q16342 344 aaPredicted RBP11.46□□□□□ -0.57
TPM1-220ENST00000559556 GPAT3Q53EU6 434 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 TSPO2Q5TGU0 170 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 ANXA8L1Q5VT79 327 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 PAQR6Q6TCH4 344 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 CMIPQ8IY22 773 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 CNOT9Q92600 299 aaKnown RBP11.46□□□□□ -0.57
TPM1-220ENST00000559556 PMM1Q92871 262 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 TMEM45BQ96B21 275 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 DDIT4LQ96D03 193 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 BOD1Q96IK1 185 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 SLC38A1Q9H2H9 487 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 UPB1Q9UBR1 384 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 MARCOQ9UEW3 520 aaPredicted RBP11.46□□□□□ -0.57
TPM1-220ENST00000559556 OSGIN1Q9UJX0 560 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 PMF1-BGLAPU3KQ54 211 aa11.46□□□□□ -0.57
TPM1-220ENST00000559556 TANC2Q9HCD6 1990 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms