RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 POLE3Q9NRF9 147 aa18.06■□□□□ 0.48
TSPAN3-206ENST00000559373 EMC3Q9P0I2 261 aa18.06■□□□□ 0.48
TSPAN3-206ENST00000559373 BTNL2Q9UIR0 455 aa18.06■□□□□ 0.48
TSPAN3-206ENST00000559373 IGKV3D-15A0A087WSY6 115 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 PGRP06401 933 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 IMPDH2P12268 514 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 TACR3P29371 465 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 IDUAP35475 653 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 WDR4P57081 412 aaKnown RBP18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 NXNQ6DKJ4 435 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 WDR60Q8WVS4 1066 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 TRAF4Q9BUZ4 470 aaPredicted RBP18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 REG4Q9BYZ8 158 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 ALG2Q9H553 416 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 RLIMQ9NVW2 624 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 TMEM181Q9P2C4 612 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 OSGIN1Q9UJX0 560 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 GPR45Q9Y5Y3 372 aa18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 SPIN1Q9Y657 262 aaPredicted RBP18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 FBN1P35555 2871 aaKnown RBP18.05■□□□□ 0.48
TSPAN3-206ENST00000559373 M0R1B8 84 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 MRPL33O75394 65 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 PGM3O95394 542 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 GKN3PP0CG01 181 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 NR2F1P10589 423 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 DPY19L1Q2PZI1 675 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 TNFAIP8L3Q5GJ75 292 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 MRPL2Q5T653 305 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 OGFOD2Q6N063 350 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 CASP12Q6UXS9 341 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 PIGXQ8TBF5 258 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 TRNT1Q96Q11 434 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 EXOSC3Q9NQT5 275 aaKnown RBP18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 ASB6Q9NWX5 421 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 HDGFL3Q9Y3E1 203 aa18.04■□□□□ 0.48
TSPAN3-206ENST00000559373 AGAP5A6NIR3 686 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 E7EQL1 145 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 SSX4O60224 188 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 TMCC2O75069 709 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 GUSBP08236 651 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 ITGA5P08648 1049 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 IL7RP16871 459 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 MAGEA8P43361 318 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 BNIP2Q12982 314 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 MAPK11Q15759 364 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 VRK2Q86Y07 508 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 USB1Q9BQ65 265 aaKnown RBP18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 POU2F3Q9UKI9 436 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 B3GALT5Q9Y2C3 310 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 SLC25A15Q9Y619 301 aa18.03■□□□□ 0.48
TSPAN3-206ENST00000559373 ETFAP13804 333 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 CDH2P19022 906 aaPredicted RBP18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 POLR2HP52434 150 aaKnown RBP18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 IRX1P78414 480 aaPredicted RBP18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 H3F3AP84243 136 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 PDK3Q15120 406 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 GABRA6Q16445 453 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 GTDC1Q4AE62 458 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 SLC9B1Q4ZJI4 515 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 MALRD1Q5VYJ5 2156 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 SLC22A25Q6T423 547 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 B3GLCTQ6Y288 498 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 LRRC74BQ6ZQY2 392 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 SPATA19Q7Z5L4 167 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 TRIML2Q8N7C3 387 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 TMEM99Q8N816 258 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 HS6ST2Q96MM7 605 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 CACNG6Q9BXT2 260 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 SLC7A10Q9NS82 523 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 CUBNO60494 3623 aa18.02■□□□□ 0.48
TSPAN3-206ENST00000559373 TMEM120BA0PK00 339 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 SNUPNO95149 360 aaKnown RBP18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 AKR7A3O95154 331 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 RPS4Y1P22090 263 aaKnown RBP18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 CD40P25942 277 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 SLC35A1P78382 337 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 CEACAM7Q14002 265 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 RPS26P11Q5JNZ5 115 aaPredicted RBP18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 TSPO2Q5TGU0 170 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 AP1ARQ63HQ0 302 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 ZNF836Q6ZNA1 936 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 P2RY8Q86VZ1 359 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 CADM2Q8N3J6 435 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 DDIT4LQ96D03 193 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 AURKBQ96GD4 344 aaPredicted RBP18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 ZBTB18Q99592 522 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 MTHFD2LQ9H903 347 aaPredicted RBP18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 TAS2R16Q9NYV7 291 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 UPB1Q9UBR1 384 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 FLVCR1Q9Y5Y0 555 aa18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 ANK3Q12955 4377 aaKnown RBP18.01■□□□□ 0.47
TSPAN3-206ENST00000559373 CFAP73A6NFT4 308 aa18■□□□□ 0.47
TSPAN3-206ENST00000559373 RFXANKO14593 260 aa18■□□□□ 0.47
TSPAN3-206ENST00000559373 GPR171O14626 319 aa18■□□□□ 0.47
TSPAN3-206ENST00000559373 HDAC3O15379 428 aa18■□□□□ 0.47
TSPAN3-206ENST00000559373 SLC1A3P43003 542 aa18■□□□□ 0.47
TSPAN3-206ENST00000559373 SLC16A1P53985 500 aa18■□□□□ 0.47
TSPAN3-206ENST00000559373 SLC25A3Q00325 362 aa18■□□□□ 0.47
TSPAN3-206ENST00000559373 DMTNQ08495 405 aa18■□□□□ 0.47
TSPAN3-206ENST00000559373 EPS8Q12929 822 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms