RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 TBX19O60806 448 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 GOSR1O95249 250 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 CPSF4O95639 269 aaKnown RBP6.52□□□□□ -1.37
SPG11-213ENST00000558988 PLAUP00749 431 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 BPGMP07738 259 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 NGFRP08138 427 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 FGF4P08620 206 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 KRT16P08779 473 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 IFI6P09912 130 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 NUDT17P0C025 328 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 UBL4AP11441 157 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 CCNA2P20248 432 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 PRPS1L1P21108 318 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 AGTR1P30556 359 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 SLC7A1P30825 629 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 RYKP34925 604 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 MAP3K8P41279 467 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 HBA1P69905 142 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 LTBQ06643 244 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 ACKR1Q16570 336 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 TMEM44Q2T9K0 475 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 PDZK1Q5T2W1 519 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 OR4F3Q6IEY1 312 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 ZCCHC12Q6PEW1 402 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 CLEC9AQ6UXN8 241 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 STAC2Q6ZMT1 411 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 ESPNLQ6ZVH7 1005 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 C16orf62Q7Z3J2 963 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 YTHDF3Q7Z739 585 aaKnown RBP6.52□□□□□ -1.37
SPG11-213ENST00000558988 CXorf67Q86X51 503 aaPredicted RBP6.52□□□□□ -1.37
SPG11-213ENST00000558988 MISPQ8IVT2 679 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 TUSC5Q8IXB3 177 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 FAM110BQ8TC76 370 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 OR5P2Q8WZ92 322 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 HOXB13Q92826 284 aaPredicted RBP6.52□□□□□ -1.37
SPG11-213ENST00000558988 C18orf12Q96KH6 178 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 SLC35G5Q96KT7 338 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 STACQ99469 402 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 SRXN1Q9BYN0 137 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 ACTR6Q9GZN1 396 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 QRSL1Q9H0R6 528 aaKnown RBP6.52□□□□□ -1.37
SPG11-213ENST00000558988 KCNK9Q9NPC2 374 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 DUSP22Q9NRW4 184 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 ASH2LQ9UBL3 628 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 FBXL7Q9UJT9 491 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 MKLN1Q9UL63 735 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 PCDHGB4Q9UN71 923 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 MTORP42345 2549 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 DSCAMO60469 2012 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 CSMD1Q96PZ7 3565 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 ITPR3Q14573 2671 aa6.52□□□□□ -1.37
SPG11-213ENST00000558988 ARID1AO14497 2285 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 A0A1W2PQD3 144 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 TRIM64A6NGJ6 449 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 TRIM64BA6NI03 449 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 SS18L1O75177 396 aaPredicted RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 CSTAP01040 98 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 LINGO3P0C6S8 592 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 UBTFL6P0CB48 400 aaPredicted RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 TFPIP10646 304 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 FPR1P21462 350 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 MATN1P21941 496 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 ENPP1P22413 925 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 IL32P24001 234 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 PSMA4P25789 261 aaKnown RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 PCSK6P29122 969 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 HOXC12P31275 282 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 CHI3L1P36222 383 aaPredicted RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 EIF1P41567 113 aaKnown RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 P2RX1P51575 399 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 ATP12AP54707 1039 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 NR1H2P55055 460 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 ABCE1P61221 599 aaKnown RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 QPRTQ15274 297 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 GUSBP1Q15486 140 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 STK11Q15831 433 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 ZNF239Q16600 458 aaKnown RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 KLHL26Q53HC5 615 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 BEX5Q5H9J7 111 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 SHEQ5VZ18 495 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 TNFAIP8L2Q6P589 184 aaPredicted RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 EMBQ6PCB8 327 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 BHLHB9Q6PI77 547 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 ZNF704Q6ZNC4 412 aaPredicted RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 RNF165Q6ZSG1 346 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 FCRLAQ7L513 359 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 NUFIP2Q7Z417 695 aaKnown RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 C6orf120Q7Z4R8 191 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 CIARTQ8N365 385 aaPredicted RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 ZNF781Q8N8C0 355 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 ANKRD42Q8N9B4 389 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 TOR1AIP2Q8NFQ8 470 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 SFXN5Q8TD22 340 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 ACTRT2Q8TDY3 377 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 AENQ8WTP8 325 aaKnown RBP6.51□□□□□ -1.37
SPG11-213ENST00000558988 XAGE5Q8WWM1 108 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.51□□□□□ -1.37
SPG11-213ENST00000558988 RAB8BQ92930 207 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 PIGTQ969N2 578 aa6.51□□□□□ -1.37
SPG11-213ENST00000558988 S100PBPQ96BU1 408 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms