RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 FBXL4Q9UKA2 621 aa11.36□□□□□ -0.59
SHMT2-233ENST00000557529 WIF1Q9Y5W5 379 aa11.36□□□□□ -0.59
SHMT2-233ENST00000557529 WDR87Q6ZQQ6 2873 aa11.36□□□□□ -0.59
SHMT2-233ENST00000557529 TRAV36DV7A0A075B6V5 113 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 TMED7-TICAM2A0A0A6YYA0 188 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 SPAARA0A1B0GVQ0 90 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 PCNX2A6NKB5 2137 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 RIIAD1A6NNX1 92 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 TERTO14746 1132 aaKnown RBP11.35□□□□□ -0.59
SHMT2-233ENST00000557529 GMFGO60234 142 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 MAN1A2O60476 641 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 TRMUO75648 421 aaKnown RBP11.35□□□□□ -0.59
SHMT2-233ENST00000557529 SLC25A12O75746 678 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 INMTO95050 263 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 MT-ATP6P00846 226 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 IFNGP01579 166 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 SERPINA7P05543 415 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 PEPDP12955 493 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 HK1P19367 917 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 C21orf33P30042 268 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-233ENST00000557529 ST13P50502 369 aaKnown RBP11.35□□□□□ -0.59
SHMT2-233ENST00000557529 TMBIM6P55061 237 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 MLF1P58340 268 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 FOXK2Q01167 660 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 FHL1Q13642 323 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 IRF3Q14653 427 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 AADACL4Q5VUY2 407 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 GPR107Q5VW38 600 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 RNLSQ5VYX0 342 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 NXNL2Q5VZ03 156 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 THSD4Q6ZMP0 1018 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 DPY19L2P2Q6ZN68 376 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 HEATR5AQ86XA9 2040 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 GID4Q8IVV7 300 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 ALDH16A1Q8IZ83 802 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 ZNF524Q96C55 264 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 IP6K3Q96PC2 410 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 VPS13AQ96RL7 3174 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 CDCP1Q9H5V8 836 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 WDR70Q9NW82 654 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 P4HTMQ9NXG6 502 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 WARS2Q9UGM6 360 aaKnown RBP11.35□□□□□ -0.59
SHMT2-233ENST00000557529 ZNF229Q9UJW7 825 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 GPR52Q9Y2T5 361 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 TMED7Q9Y3B3 224 aa11.35□□□□□ -0.59
SHMT2-233ENST00000557529 USP34Q70CQ2 3546 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 C17orf51A8MQB3 221 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 A8MVM7 634 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 FAM47E-STBD1D6RA91 191 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 IDH3BO43837 385 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 PPP1R3DO95685 299 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 HIST1H2ABP04908 130 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 PAICSP22234 425 aaKnown RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 PSMB9P28065 219 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 NOS3P29474 1203 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 RBMS1P29558 406 aaKnown RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 PTGDSP41222 190 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 APOBEC1P41238 236 aaKnown RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 CASP3P42574 277 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 ZNF41P51814 821 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 MAP2K6P52564 334 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 MLLT10P55197 1068 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 GP2P55259 537 aaKnown RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 CDH11P55287 796 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 RPS4XP62701 263 aaKnown RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 EGR4Q05215 589 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 RAB40BQ12829 278 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 TMED1Q13445 227 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 ARMC4Q5T2S8 1044 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 B3GNT6Q6ZMB0 384 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 HIST3H2AQ7L7L0 130 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 CXXC5Q7LFL8 322 aaKnown RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 ZNF367Q7RTV3 350 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 BCDIN3DQ7Z5W3 292 aaKnown RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 TMEM156Q8N614 296 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 OR6S1Q8NH40 331 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 STK35Q8TDR2 534 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 HIST1H2ACQ93077 130 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 ISOC1Q96CN7 298 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 GPX7Q96SL4 187 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 KLHDC3Q9BQ90 382 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 ENKD1Q9H0I2 346 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 FKRPQ9H9S5 495 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 GALNT9Q9HCQ5 603 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 NANSQ9NR45 359 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 PTTG2Q9NZH5 202 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 KLHL21Q9UJP4 597 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 DIMT1Q9UNQ2 313 aaKnown RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 HIF3AQ9Y2N7 669 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 SLC6A5Q9Y345 797 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 CHCHD2Q9Y6H1 151 aaPredicted RBP11.34□□□□□ -0.59
SHMT2-233ENST00000557529 COMMD3-BMI1R4GMX3 469 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 A0A0C4DFX4 3053 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 EXPH5Q8NEV8 1989 aa11.34□□□□□ -0.59
SHMT2-233ENST00000557529 PRR23D1E9PI22 279 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-233ENST00000557529 ETV2O00321 342 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-233ENST00000557529 ARPC3O15145 178 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms