RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 RRAGDQ9NQL2 400 aaPredicted RBP10.85□□□□□ -0.67
PSEN1-221ENST00000557293 PARPBPQ9NWS1 579 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 C1orf109Q9NX04 203 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 TRAPPC4Q9Y296 219 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 HDGFL3Q9Y3E1 203 aa10.85□□□□□ -0.67
PSEN1-221ENST00000557293 TRRAPQ9Y4A5 3859 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 G3V2L1 256 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 hCG_2039718K7EN88 272 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 NR5A2O00482 541 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 UGT2B17O75795 530 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 CYP7B1O75881 506 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 IGLV1-44P01699 117 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 CRYAAP02489 173 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 SNRPAP09012 282 aaKnown RBP10.84□□□□□ -0.67
PSEN1-221ENST00000557293 CECR9P0C854 216 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 CDH2P19022 906 aaPredicted RBP10.84□□□□□ -0.67
PSEN1-221ENST00000557293 COL8A2P25067 703 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 MAGEA8P43361 318 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 CLK1P49759 484 aaKnown RBP10.84□□□□□ -0.67
PSEN1-221ENST00000557293 OR2B6P58173 313 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 LMO4P61968 165 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 SLC7A5Q01650 507 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 PLAURQ03405 335 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 ADRM1Q16186 407 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 MAPK14Q16539 360 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 MSMPQ1L6U9 139 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 TBRG1Q3YBR2 411 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 ELFN2Q5R3F8 820 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 LINGO2Q7L985 606 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 MYPOPQ86VE0 399 aaPredicted RBP10.84□□□□□ -0.67
PSEN1-221ENST00000557293 CCNYL1Q8N7R7 359 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 FAM71CQ8NEG0 241 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 NUP37Q8NFH4 326 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 TMEM234Q8WY98 164 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 TMEM45BQ96B21 275 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 MTERF3Q96E29 417 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 ZHX1-C8orf76Q96EF9 292 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 ZNF385AQ96PM9 386 aaKnown RBP10.84□□□□□ -0.67
PSEN1-221ENST00000557293 OR7D2Q96RA2 312 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 RAB17Q9H0T7 212 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 NELFAQ9H3P2 528 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 CDC42EP4Q9H3Q1 356 aaKnown RBP10.84□□□□□ -0.67
PSEN1-221ENST00000557293 SERHL2Q9H4I8 314 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 ZNF442Q9H7R0 627 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 OBP2BQ9NPH6 170 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 TMEM181Q9P2C4 612 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 CHRNA9Q9UGM1 479 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 ATP6V1HQ9UI12 483 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 EMCNQ9ULC0 261 aa10.84□□□□□ -0.67
PSEN1-221ENST00000557293 SH3PXD2BA1X283 911 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 CSTAP01040 98 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 LAMP1P11279 417 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 CREB1P16220 341 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 NPR2P20594 1047 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 EPHA1P21709 976 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 PGM1P36871 562 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 TUBA1BP68363 451 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 TUBA4AP68366 448 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 GPR68Q15743 365 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 PDCD2Q16342 344 aaPredicted RBP10.83□□□□□ -0.68
PSEN1-221ENST00000557293 C3orf36Q3SXR2 165 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 SHISA2Q6UWI4 295 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 TUBA1AQ71U36 451 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 CDK20Q8IZL9 346 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 OR7A2PQ8NGA2 310 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 OR4F15Q8NGB8 312 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 OR5D16Q8NGK9 328 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 OR1K1Q8NGR3 316 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 LRRC37BQ96QE4 947 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 TUBB1Q9H4B7 451 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 LPAR2Q9HBW0 351 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 USP22Q9UPT9 525 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 SLC9A8Q9Y2E8 581 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 PCDHB14Q9Y5E9 798 aa10.83□□□□□ -0.68
PSEN1-221ENST00000557293 ARPC4-TTLL3A0A0A6YYG9 625 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 LGI1O95970 557 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 MSMBP08118 114 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 CELA3BP08861 270 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 ADRA2AP08913 450 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 UBTFL6P0CB48 400 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-221ENST00000557293 UROSP10746 265 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 BCKDHAP12694 445 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 LIMS1P48059 325 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 TP53BP2Q13625 1128 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 ATP6AP1LQ52LC2 224 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 CLEC6AQ6EIG7 209 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 TREML4Q6UXN2 200 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 FRMD7Q6ZUT3 714 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 SPATA21Q7Z572 469 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 FAM169BQ8N8A8 192 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 OR5P2Q8WZ92 322 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 ZG16BQ96DA0 208 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 AURKBQ96GD4 344 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-221ENST00000557293 G6PC2Q9NQR9 355 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 TMEM45AQ9NWC5 275 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 TREM2Q9NZC2 230 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 FBXO9Q9UK97 447 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-221ENST00000557293 MKLN1Q9UL63 735 aa10.82□□□□□ -0.68
PSEN1-221ENST00000557293 FAF1Q9UNN5 650 aaPredicted RBP10.82□□□□□ -0.68
PSEN1-221ENST00000557293 LOC105371242A0A075B767 164 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms