RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 TRAV26-1A0A087WT03 109 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 PSMB11A5LHX3 300 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 TRDCB7Z8K6 153 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 F5H6K3 240 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 PANO1I0J062 215 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 ZNF264O43296 627 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 GMFGO60234 142 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 MMP23AO75900 390 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 LGI1O95970 557 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 COX5AP20674 150 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 HOXD10P28358 340 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 GRIA1P42261 906 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 GBX2P52951 348 aaPredicted RBP1.94□□□□□ -2.1
SCFD1-218ENST00000556256 RPS8P62241 208 aaKnown RBP1.94□□□□□ -2.1
SCFD1-218ENST00000556256 KLRC3Q07444 240 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 ZNF763Q0D2J5 394 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 KLRB1Q12918 225 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 IL24Q13007 206 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 TRIM16LQ309B1 348 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 SFT2D3Q587I9 215 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 OR2G6Q5TZ20 316 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 C11orf71Q6IPW1 123 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 CCDC80Q76M96 950 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 ERI1Q8IV48 349 aaKnown RBP1.94□□□□□ -2.1
SCFD1-218ENST00000556256 VSTM4Q8IW00 320 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 NRMQ8IXM6 262 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 ENTHD1Q8IYW4 607 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 TMEM252Q8N6L7 170 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 NKAPP1Q8N9T2 125 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 OR2L5Q8NG80 312 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 OR2AP1Q8NGE2 309 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 OR52I1Q8NGK6 324 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 SLC41A3Q96GZ6 507 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 IMMP1LQ96LU5 166 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 MTMR9Q96QG7 549 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 HES7Q9BYE0 225 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 PARD6BQ9BYG5 372 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 NT5C3AQ9H0P0 336 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 MAGT1Q9H0U3 335 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 POPDC2Q9HBU9 364 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 SH2D2AQ9NP31 389 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 CD274Q9NZQ7 290 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 EXTL2Q9UBQ6 330 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 UGT2A1Q9Y4X1 527 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 MEGF6O75095 1541 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 ARHGAP23Q9P227 1491 aa1.94□□□□□ -2.1
SCFD1-218ENST00000556256 CLSPNQ9HAW4 1339 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 SPRR5A0A1B0GTR4 108 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 A0A1B0GUS0 222 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 TMEM110-MUSTN1A8MSY1 372 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 GPR89AB7ZAQ6 455 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 DCTN6O00399 190 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 CXCL11O14625 94 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 ZNF861PO60384 105 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 RAMP3O60896 148 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 ZNF780AO75290 641 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-218ENST00000556256 IGLV1-47P01700 117 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 GPR89BP0CG08 455 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 CD1EP15812 388 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 PCMT1P22061 227 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 CRYBB1P53674 252 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-218ENST00000556256 BIDP55957 195 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 RIPK1Q13546 671 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 HERPUD1Q15011 391 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 PDK3Q15120 406 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 NSUN5P1Q3KNT7 163 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 CARD16Q5EG05 197 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 CASC10Q5T4H9 136 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 Q6ZPB1 254 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-218ENST00000556256 ARCQ7LC44 396 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 PRSS41Q7RTY9 318 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 TMEM110Q86TL2 294 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 VRK2Q86Y07 508 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 TBC1D21Q8IYX1 336 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 MTURNQ8N3F0 131 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 ALLCQ8N6M5 410 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 ATP6V0D2Q8N8Y2 350 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 NEIL3Q8TAT5 605 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 ANKRD49Q8WVL7 239 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 HTR3CQ8WXA8 447 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 EFHD2Q96C19 240 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-218ENST00000556256 SLC35E1Q96K37 410 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 PSKH2Q96QS6 385 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 GAL3ST1Q99999 423 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 C6orf203Q9P0P8 240 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-218ENST00000556256 KIF25Q9UIL4 384 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 NAP1L2Q9ULW6 460 aaPredicted RBP1.93□□□□□ -2.1
SCFD1-218ENST00000556256 NEUROG3Q9Y4Z2 214 aa1.93□□□□□ -2.1
SCFD1-218ENST00000556256 SH3TC1Q8TE82 1336 aa1.92□□□□□ -2.1
SCFD1-218ENST00000556256 IGHV3OR16-13A0A075B7E8 117 aa1.92□□□□□ -2.1
SCFD1-218ENST00000556256 IGHV1OR21-1A0A087WYE8 117 aa1.92□□□□□ -2.1
SCFD1-218ENST00000556256 C15orf38-AP3S2A0A0A6YYH1 394 aa1.92□□□□□ -2.1
SCFD1-218ENST00000556256 A0A0J9YXY3 114 aa1.92□□□□□ -2.1
SCFD1-218ENST00000556256 IDSB3KWA1 339 aa1.92□□□□□ -2.1
SCFD1-218ENST00000556256 GFYI3L273 518 aa1.92□□□□□ -2.1
SCFD1-218ENST00000556256 EMC8O43402 210 aa1.92□□□□□ -2.1
SCFD1-218ENST00000556256 PFKFB2O60825 505 aa1.92□□□□□ -2.1
SCFD1-218ENST00000556256 N4BP1O75113 896 aaKnown RBP1.92□□□□□ -2.1
SCFD1-218ENST00000556256 SNAPINO95295 136 aa1.92□□□□□ -2.1
SCFD1-218ENST00000556256 STAMBPO95630 424 aa1.92□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms