RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 GID8Q9NWU2 228 aa13.54□□□□□ -0.24
ACTN1-217ENST00000556203 ELOVL5Q9NYP7 299 aa13.54□□□□□ -0.24
ACTN1-217ENST00000556203 TMEM181Q9P2C4 612 aa13.54□□□□□ -0.24
ACTN1-217ENST00000556203 KLHL9Q9P2J3 617 aa13.54□□□□□ -0.24
ACTN1-217ENST00000556203 SLC13A4Q9UKG4 626 aa13.54□□□□□ -0.24
ACTN1-217ENST00000556203 ADGRG4Q8IZF6 3080 aa13.54□□□□□ -0.24
ACTN1-217ENST00000556203 MED12LQ86YW9 2145 aa13.54□□□□□ -0.24
ACTN1-217ENST00000556203 SNX3O60493 162 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 GCM2O75603 506 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-217ENST00000556203 OPN1SWP03999 348 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 YES1P07947 543 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 HTR2AP28223 471 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 KRTAP10-9P60411 292 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 RASGEF1BQ0VAM2 473 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 BNIP2Q12982 314 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 VMACQ2NL98 169 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 NUFIP2Q7Z417 695 aaKnown RBP13.53□□□□□ -0.24
ACTN1-217ENST00000556203 CPLX4Q7Z7G2 160 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 BHLHE22Q8NFJ8 381 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-217ENST00000556203 C3orf49Q96BT1 292 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 ZNF300Q96RE9 604 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-217ENST00000556203 ECSITQ9BQ95 431 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 ING1Q9UK53 422 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-217ENST00000556203 TRAPPC4Q9Y296 219 aa13.53□□□□□ -0.24
ACTN1-217ENST00000556203 CACNA1DQ01668 2161 aa13.52□□□□□ -0.24
ACTN1-217ENST00000556203 M0QX08 132 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 AIM2O14862 343 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 DNPH1O43598 174 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 EPXP11678 715 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 IMPDH2P12268 514 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 COX4I1P13073 169 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 UGT2B10P36537 528 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 PCYT1AP49585 367 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 RGS8P57771 180 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-217ENST00000556203 INTS11Q5TA45 600 aaKnown RBP13.52□□□□□ -0.25
ACTN1-217ENST00000556203 ABLIM2Q6H8Q1 611 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 PATL1Q86TB9 770 aaKnown RBP13.52□□□□□ -0.25
ACTN1-217ENST00000556203 ATG4DQ86TL0 474 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-217ENST00000556203 STK32CQ86UX6 486 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 TMEM200AQ86VY9 491 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 CALHM3Q86XJ0 350 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 TREML1Q86YW5 311 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 LURAP1Q96LR2 239 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 TACO1Q9BSH4 297 aaKnown RBP13.52□□□□□ -0.25
ACTN1-217ENST00000556203 POTEKPQ9BYX7 375 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 BCO1Q9HAY6 547 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 KLHL28Q9NXS3 571 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 RPS6KB2Q9UBS0 482 aa13.52□□□□□ -0.25
ACTN1-217ENST00000556203 SH3D21A4FU49 640 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 A8MVM7 634 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 ZNF814B7Z6K7 855 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 C16orf97H3BN30 126 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 M0R3H8 397 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 FPR1P21462 350 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 CCKARP32238 428 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 IDUAP35475 653 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 NCALDP61601 193 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 SLC35A1P78382 337 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 DUSP7Q16829 419 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 TFAP2EQ6VUC0 442 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 CCDC103Q8IW40 242 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 LSMEM1Q8N8F7 131 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 GPR32P1Q8NGA4 272 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 OR52E4Q8NGH9 312 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 PIGXQ8TBF5 258 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 ZNF775Q96BV0 537 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-217ENST00000556203 TAMM41Q96BW9 452 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 ZNF583Q96ND8 569 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 DACH2Q96NX9 599 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 WFDC6Q9BQY6 131 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 GPATCH1Q9BRR8 931 aaKnown RBP13.51□□□□□ -0.25
ACTN1-217ENST00000556203 PRR14Q9BWN1 585 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 KLHL4Q9C0H6 718 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 MYLK2Q9H1R3 596 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 TESQ9UGI8 421 aaKnown RBP13.51□□□□□ -0.25
ACTN1-217ENST00000556203 NDRG3Q9UGV2 375 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 USP22Q9UPT9 525 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 TESMINQ9Y4I5 508 aa13.51□□□□□ -0.25
ACTN1-217ENST00000556203 A0A1B0GWA3 101 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 LIPT2A6NK58 231 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 ELOA3DA6NLF2 546 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-217ENST00000556203 A6NNC1 897 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 ZNF724A8MTY0 619 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 FAM220BPB1ANY3 271 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 TMEM229AB2RXF0 380 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 RAMP1O60894 148 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 CTAG2O75638 210 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 LGI1O95970 557 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 GPIP06744 558 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 CEACAM7Q14002 265 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 DAZAP2Q15038 168 aaPredicted RBP13.5□□□□□ -0.25
ACTN1-217ENST00000556203 PDK3Q15120 406 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 OR7A5Q15622 319 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 ELOA3BQ3SY89 546 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 C1orf140Q5VVS0 124 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 ERICH5Q6P6B1 374 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 C6orf89Q6UWU4 347 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 BEND4Q6ZU67 534 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 ELOA3Q8NG57 546 aa13.5□□□□□ -0.25
ACTN1-217ENST00000556203 SLC26A7Q8TE54 656 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms