RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 AGRPO00253 132 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 HCN1O60741 890 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 SCG5P05408 212 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 PNMTP11086 282 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 IL12BP29460 328 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 SLC1A3P43003 542 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 RGS6P49758 472 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 RPS3AP61247 264 aaKnown RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 CRYZQ08257 329 aaKnown RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 SF3A2Q15428 464 aaKnown RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 ISXQ2M1V0 245 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 TMEM81Q6P7N7 255 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 HSDL2Q6YN16 418 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 PRR23CQ6ZRP0 262 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 RRM2BQ7LG56 351 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 FAM122BQ7Z309 247 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 CADM2Q8N3J6 435 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 PROKR2Q8NFJ6 384 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 NDNFQ8TB73 568 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 PHOSPHO1Q8TCT1 267 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 GPR119Q8TDV5 335 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 RHBDD1Q8TEB9 315 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 RPL3LQ92901 407 aaKnown RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 C8orf44Q96CB5 159 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 LIN37Q96GY3 246 aaPredicted RBP8.11□□□□□ -1.11
TDP1-210ENST00000554976 SLC38A2Q96QD8 506 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 RACGAP1Q9H0H5 632 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 SH2D2AQ9NP31 389 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 BAIAP2Q9UQB8 552 aa8.11□□□□□ -1.11
TDP1-210ENST00000554976 MPDZO75970 2070 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 CABIN1Q9Y6J0 2220 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 KIAA1549Q9HCM3 1950 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 MCIDASD6RGH6 385 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 LRRN3E7EW58 273 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 RCBTB2O95199 551 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 BGLAPP02818 100 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 FBXO45P0C2W1 286 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 LIMS3P0CW19 117 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 LIMS4P0CW20 117 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 UGT2B10P36537 528 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 TGFBR1P36897 503 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 CD79BP40259 229 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 P2RX1P51575 399 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 ACSM1Q08AH1 577 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 P2RY8Q86VZ1 359 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 SIRT6Q8N6T7 355 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 EXD3Q8N9H8 876 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 SPERTQ8NA61 448 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 OR5W2Q8NH69 310 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 GIMAP1Q8WWP7 306 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 SGTBQ96EQ0 304 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 CRB3Q9BUF7 120 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 DDA1Q9BW61 102 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 NMNAT2Q9BZQ4 307 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 MMP25Q9NPA2 562 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 ISYNA1Q9NPH2 558 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 NRIP3Q9NQ35 241 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 HIF3AQ9Y2N7 669 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 HS3ST3B1Q9Y662 390 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 EML6Q6ZMW3 1958 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 TRBV11-1A0A0K0K1C0 115 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 TMEM129A0AVI4 362 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 CDC40O60508 579 aaKnown RBP eCLIP8.1□□□□□ -1.11
TDP1-210ENST00000554976 REM1O75628 298 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 CH25HO95992 272 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 HMGN1P05114 100 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 TGM1P22735 817 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 PSMB9P28065 219 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 ST13P50502 369 aaKnown RBP8.1□□□□□ -1.11
TDP1-210ENST00000554976 FBXW4P57775 412 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 EFR3AQ14156 821 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 TMEM44Q2T9K0 475 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 ZNF791Q3KP31 576 aaPredicted RBP8.1□□□□□ -1.11
TDP1-210ENST00000554976 ANKDD1AQ495B1 522 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 PIP4P1Q86T03 277 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 TMCO5AQ8N6Q1 288 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 MOGAT1Q96PD6 335 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 PRRG3Q9BZD7 231 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.1□□□□□ -1.11
TDP1-210ENST00000554976 SF3B6Q9Y3B4 125 aaKnown RBP8.1□□□□□ -1.11
TDP1-210ENST00000554976 ZNF337Q9Y3M9 751 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 ZNF318Q5VUA4 2279 aa8.1□□□□□ -1.11
TDP1-210ENST00000554976 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.09□□□□□ -1.11
TDP1-210ENST00000554976 SLC22A1O15245 554 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 CD36P16671 472 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 ZNF182P17025 639 aaPredicted RBP8.09□□□□□ -1.11
TDP1-210ENST00000554976 GADD45AP24522 165 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 MTNR1AP48039 350 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 GGTLC2Q14390 218 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 NTRK2Q16620 822 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 KLHL22Q53GT1 634 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 SLC25A53Q5H9E4 307 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 VASNQ6EMK4 673 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 CXXC5Q7LFL8 322 aaKnown RBP8.09□□□□□ -1.11
TDP1-210ENST00000554976 TIPARPQ7Z3E1 657 aaKnown RBP8.09□□□□□ -1.11
TDP1-210ENST00000554976 OR2Y1Q8NGV0 311 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 TM9SF4Q92544 642 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 NPAS1Q99742 590 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 MND1Q9BWT6 205 aa8.09□□□□□ -1.11
TDP1-210ENST00000554976 ULBP3Q9BZM4 244 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms