RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 CAVIN4Q5BKX8 364 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 TMEM255AQ5JRV8 349 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 CCDC122Q5T0U0 273 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 ACSM5Q6NUN0 579 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 CCDC137Q6PK04 289 aaKnown RBP1.91□□□□□ -2.1
VRK1-202ENST00000553683 ACOT7LQ6ZUV0 252 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 SLC7A5P1Q8MH63 180 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 LINC01561Q8N1V8 128 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 MTURNQ8N3F0 131 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 PNKDQ8N490 385 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 CNNM3Q8NE01 707 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 PAQR8Q8TEZ7 354 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 CHCHD10Q8WYQ3 142 aaPredicted RBP1.91□□□□□ -2.1
VRK1-202ENST00000553683 C8orf76Q96K31 380 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 PGLYRP4Q96LB8 373 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 FAM111AQ96PZ2 611 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 KLHDC3Q9BQ90 382 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 OR11A1Q9GZK7 315 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 DHX33Q9H6R0 707 aaKnown RBP1.91□□□□□ -2.1
VRK1-202ENST00000553683 SPATA7Q9P0W8 599 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 MTRF1LQ9UGC7 380 aaKnown RBP1.91□□□□□ -2.1
VRK1-202ENST00000553683 KIF25Q9UIL4 384 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 DCAF1Q9Y4B6 1507 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 SH3TC1Q8TE82 1336 aa1.91□□□□□ -2.1
VRK1-202ENST00000553683 EIF4G1Q04637 1599 aaKnown RBP1.9□□□□□ -2.1
VRK1-202ENST00000553683 THOC2Q8NI27 1593 aaKnown RBP1.9□□□□□ -2.1
VRK1-202ENST00000553683 PPIAL4EA0A075B759 164 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 A0A0G2JRQ6 117 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 A0A0U1RQV5 110 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 GSAPA4D1B5 854 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 ANKRD63C9JTQ0 380 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 NPIPA7E9PJI5 369 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 PPIAL4DF5H284 164 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 H0YHG0 523 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 CASQ2O14958 399 aaPredicted RBP1.9□□□□□ -2.11
VRK1-202ENST00000553683 PRKYO43930 277 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 MED6O75586 246 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 UFL1O94874 794 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 OR4F21O95013 312 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 NPIPA8P0DM63 369 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 PPIAL4FP0DN26 164 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 TNNI3P19429 210 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 CALB2P22676 271 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 YWHABP31946 246 aaKnown RBP1.9□□□□□ -2.11
VRK1-202ENST00000553683 KIR2DS4P43632 304 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 PRKXP51817 358 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 GTF2A1P52655 376 aaPredicted RBP1.9□□□□□ -2.11
VRK1-202ENST00000553683 C1QTNF8P60827 252 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 SARNPP82979 210 aaKnown RBP1.9□□□□□ -2.11
VRK1-202ENST00000553683 TRIP10Q15642 601 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 LDLRAP1Q5SW96 308 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 TTC19Q6DKK2 380 aaPredicted RBP1.9□□□□□ -2.11
VRK1-202ENST00000553683 CBLN3Q6UW01 205 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 C6orf120Q7Z4R8 191 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 LYPD1Q8N2G4 141 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 LRRC43Q8N309 656 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 SPERTQ8NA61 448 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 ZNF540Q8NDQ6 660 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 IPMKQ8NFU5 416 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 SUN5Q8TC36 379 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 PNPT1Q8TCS8 783 aaKnown RBP1.9□□□□□ -2.11
VRK1-202ENST00000553683 MGARPQ8TDB4 240 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 RNF185Q96GF1 192 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 RBM14Q96PK6 669 aaKnown RBP1.9□□□□□ -2.11
VRK1-202ENST00000553683 SLC6A7Q99884 636 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 RASL11BQ9BPW5 248 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 SLC35A5Q9BS91 424 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 CAPS2Q9BXY5 557 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 CHMP5Q9NZZ3 219 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 CTNNA3Q9UI47 895 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 NPIPA1Q9UND3 350 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 TRAF3IP3Q9Y228 551 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 PIN4Q9Y237 131 aaKnown RBP1.9□□□□□ -2.11
VRK1-202ENST00000553683 MAD1L1Q9Y6D9 718 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 CACNA1AO00555 2505 aa1.9□□□□□ -2.11
VRK1-202ENST00000553683 UNC13AQ9UPW8 1703 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 SYNJ2BP-COX16A0A087WUM0 186 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 FCN1O00602 326 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 SDHDO14521 159 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 RNF113AO15541 343 aaKnown RBP1.89□□□□□ -2.11
VRK1-202ENST00000553683 RIPK2O43353 540 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 NMT2O60551 498 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 F10P00742 488 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 PCCBP05166 539 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 PNMA6AP0CW24 399 aaPredicted RBP1.89□□□□□ -2.11
VRK1-202ENST00000553683 KRT13P13646 458 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 POU2F1P14859 743 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 DESP17661 470 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 HSD17B2P37059 387 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 MAGEA5P43359 124 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 KPNA2P52292 529 aaKnown RBP1.89□□□□□ -2.11
VRK1-202ENST00000553683 AP3M2P53677 418 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 TAS2R19P59542 299 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 PRPS1P60891 318 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 GBE1Q04446 702 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 NRF1Q16656 503 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 BOLA3Q53S33 107 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 PAGE3Q5JUK9 113 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 C1orf100Q5SVJ3 147 aa1.89□□□□□ -2.11
VRK1-202ENST00000553683 AP1ARQ63HQ0 302 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms