RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SUPT7LO94864 414 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 TGFAP01135 160 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 IGHV3-9P01782 118 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 ENO1P06733 434 aaKnown RBP6.35□□□□□ -1.39
ATXN3-219ENST00000553488 ITGA5P08648 1049 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF23P17027 643 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 IL2RGP31785 369 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 FRKP42685 505 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-219ENST00000553488 PAFAH1B1P43034 410 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 COMPP49747 757 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-219ENST00000553488 P2RX1P51575 399 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 PHC1P78364 1004 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 BTKQ06187 659 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 C2orf54Q08AI8 447 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 LCP2Q13094 533 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 ZSWIM7Q19AV6 140 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 VMACQ2NL98 169 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 NDUFAF6Q330K2 333 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 FBXW9Q5XUX1 488 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 ANKRD26P1Q6NSI1 321 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 KLHL17Q6TDP4 642 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 C12orf54Q6X4T0 127 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 MTERF4Q7Z6M4 381 aaKnown RBP6.35□□□□□ -1.39
ATXN3-219ENST00000553488 GALNT5Q7Z7M9 940 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 WDR31Q8NA23 367 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 SPATA4Q8NEY3 305 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 GPR119Q8TDV5 335 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 CIDECQ96AQ7 238 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-219ENST00000553488 C3orf49Q96BT1 292 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 OTUB1Q96FW1 271 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-219ENST00000553488 EGLN2Q96KS0 407 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 PAFAH2Q99487 392 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 NAPGQ99747 312 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-219ENST00000553488 BPESC1Q9GZL8 116 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 ANKZF1Q9H8Y5 726 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 ZDHHC18Q9NUE0 388 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 NINJ2Q9NZG7 142 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 WBP11Q9Y2W2 641 aaKnown RBP6.35□□□□□ -1.39
ATXN3-219ENST00000553488 FKBP7Q9Y680 259 aa6.35□□□□□ -1.39
ATXN3-219ENST00000553488 NPIPA5A0A0B4J1W7 369 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 LOC390937A0A1W2PQ73 354 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 NPIPA7E9PJI5 369 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 M0R1B8 84 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 TBX19O60806 448 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 RSL1D1O76021 490 aaKnown RBP6.34□□□□□ -1.39
ATXN3-219ENST00000553488 VENTXO95231 258 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 HSPA4LO95757 839 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 NPIPA8P0DM63 369 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 SLC7A1P30825 629 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 APOBEC3AP31941 199 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-219ENST00000553488 PKNOX1P55347 436 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 CHRNB3Q05901 458 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 PDE7AQ13946 482 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 KIAA0040Q15053 153 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 PDK3Q15120 406 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 GABRA6Q16445 453 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 KLHL26Q53HC5 615 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 NOXRED1Q6NXP6 359 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 C3orf33Q6P1S2 294 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 ZNF100Q8IYN0 542 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 MMGT1Q8N4V1 131 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 LINC00482Q8N8I6 264 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 COX18Q8N8Q8 333 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 ATP6V1C2Q8NEY4 427 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 CEP70Q8NHQ1 597 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 FAM76AQ8TAV0 307 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 PHOSPHO1Q8TCT1 267 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 ZFAND2BQ8WV99 257 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 DCAKDQ8WVC6 231 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 CDS1Q92903 461 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 ZMYND19Q96E35 227 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-219ENST00000553488 L3HYPDHQ96EM0 354 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 C16orf58Q96GQ5 468 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 FCRL1Q96LA6 429 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 MUS81Q96NY9 551 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 FOXN4Q96NZ1 517 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 TRMOQ9BU70 441 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 GSTO2Q9H4Y5 243 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 MYOZ1Q9NP98 299 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-219ENST00000553488 DUSP22Q9NRW4 184 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 SIRT3Q9NTG7 399 aaPredicted RBP6.34□□□□□ -1.39
ATXN3-219ENST00000553488 TAS2R16Q9NYV7 291 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 CARD8Q9Y2G2 431 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 STK38LQ9Y2H1 464 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 CCL27Q9Y4X3 112 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 PMF1-BGLAPU3KQ54 211 aa6.34□□□□□ -1.39
ATXN3-219ENST00000553488 CIB4A0PJX0 185 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 LRP5LA4QPB2 252 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 TRIM49D1C9J1S8 452 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 NUDT14O95848 222 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 INHBAP08476 426 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 TACSTD2P09758 323 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 ALOX5P09917 674 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 HPGDP15428 266 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 IMPDH1P20839 514 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 PRPH2P23942 346 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 DIO1P49895 249 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 SERPINB9P50453 376 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 SLC16A1P53985 500 aa6.33□□□□□ -1.4
ATXN3-219ENST00000553488 PRKAG1P54619 331 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms