RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 UBE2V1Q13404 147 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 SELPLGQ14242 412 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 ELOCQ15369 112 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 YIF1BQ5BJH7 314 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 DCAF10Q5QP82 559 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 AGBL2Q5U5Z8 902 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 FAM46CQ5VWP2 391 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 ACSM2BQ68CK6 577 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 DEGS2Q6QHC5 323 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 C5orf46Q6UWT4 87 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 ARSKQ6UWY0 536 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 SCARA5Q6ZMJ2 495 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 TRMT10CQ7L0Y3 403 aaKnown RBP4.32□□□□□ -1.72
ATXN3-218ENST00000553309 PXKQ7Z7A4 578 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 ACOT1Q86TX2 421 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 TAC4Q86UU9 113 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 TPRA1Q86W33 373 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 KCNMB4Q86W47 210 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 PTOV1Q86YD1 416 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 UBE2J2Q8N2K1 259 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 UBL4BQ8N7F7 174 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 BMPERQ8N8U9 685 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 C12orf29Q8N999 325 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 SNX31Q8N9S9 440 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 WFDC11Q8NEX6 87 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 OR9A1PQ8NGU1 263 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 CAPSLQ8WWF8 208 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 TAMM41Q96BW9 452 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 ELMOD3Q96FG2 381 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 PLEKHA8Q96JA3 519 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 DNAJC1Q96KC8 554 aaKnown RBP4.32□□□□□ -1.72
ATXN3-218ENST00000553309 OR2A14Q96R47 310 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 KLF6Q99612 283 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-218ENST00000553309 SEC22CQ9BRL7 303 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 TMEM121Q9BTD3 319 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 GFRA4Q9GZZ7 299 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 SLC22A4Q9H015 551 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 C1orf21Q9H246 121 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 SEMA6AQ9H2E6 1030 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 NARFLQ9H6Q4 476 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 SMYD3Q9H7B4 428 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 APOBEC3GQ9HC16 384 aaKnown RBP4.32□□□□□ -1.72
ATXN3-218ENST00000553309 PPANQ9NQ55 473 aaKnown RBP4.32□□□□□ -1.72
ATXN3-218ENST00000553309 FGF21Q9NSA1 209 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 C19orf12Q9NSK7 152 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 RBAKQ9NYW8 714 aaPredicted RBP4.32□□□□□ -1.72
ATXN3-218ENST00000553309 ACTR3BQ9P1U1 418 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 TXNDC16Q9P2K2 825 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 RSL24D1Q9UHA3 163 aaKnown RBP4.32□□□□□ -1.72
ATXN3-218ENST00000553309 VPS28Q9UK41 221 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 MRPS7Q9Y2R9 242 aaKnown RBP4.32□□□□□ -1.72
ATXN3-218ENST00000553309 ARL2BPQ9Y2Y0 163 aa4.32□□□□□ -1.72
ATXN3-218ENST00000553309 MDC1Q14676 2089 aaKnown RBP4.32□□□□□ -1.72
ATXN3-218ENST00000553309 MYH11P35749 1972 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 TRGV8A0A0C4DH27 118 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 A0A1W2PQ72 361 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 A0A1W2PRG6 482 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 OR2M5A3KFT3 312 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 CCDC160A6NGH7 325 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 IGLON5A6NGN9 336 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 NDUFS6O75380 124 aaKnown RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 RAB3DO95716 219 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 TSHBP01222 138 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 CTSLP07711 333 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 FGF4P08620 206 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 STSP08842 583 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 ALPIP09923 528 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 THRAP10827 490 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 FDPSP14324 419 aaKnown RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 HLA-DPA1P20036 260 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 CD1CP29017 333 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SERPINB1P30740 379 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 PCGF2P35227 344 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 CDK9P50750 372 aaKnown RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 GPR143P51810 404 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 LIMK2P53671 638 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 DRG2P55039 364 aaKnown RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 CDH4P55283 916 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 EIF3EP60228 445 aaKnown RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 GNB1P62873 340 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 TNNC1P63316 161 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 CSNK1G2P78368 415 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 MAT1AQ00266 395 aaKnown RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 GLO1Q04760 184 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SELENBP1Q13228 472 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 CDH18Q13634 790 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 FLOT2Q14254 428 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 OXA1LQ15070 435 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 MEA1Q16626 185 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 KYNUQ16719 465 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 MEP1AQ16819 746 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 MPP7Q5T2T1 576 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 ZDHHC20Q5W0Z9 365 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 KRT79Q5XKE5 535 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 FAM53AQ6NSI3 398 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SUSD1Q6UWL2 747 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 MSANTD1Q6ZTZ1 278 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 GPRIN3Q6ZVF9 776 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 ZNF534Q76KX8 674 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 FAM122BQ7Z309 247 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms