RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 RAC3P60763 192 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 KRT72Q14CN4 511 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 TMEM176BQ3YBM2 270 aaPredicted RBP9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 FAM91A1Q658Y4 838 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 LRRC17Q8N6Y2 441 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 WDR31Q8NA23 367 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 MUS81Q96NY9 551 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 ZNF300Q96RE9 604 aaPredicted RBP9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 ZNF747Q9BV97 191 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 RBM4Q9BWF3 364 aaKnown RBP9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 ELOVL6Q9H5J4 265 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 FKRPQ9H9S5 495 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 NTMQ9P121 344 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 TAGLN3Q9UI15 199 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 SNX6Q9UNH7 406 aa9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 RRP15Q9Y3B9 282 aaKnown RBP9.93□□□□□ -0.82
SUPT16H-202ENST00000552829 IGHV3-15A0A0B4J1V0 119 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 TTC36A6NLP5 189 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 C9JVG2 144 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 M0R1B8 84 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 SLC28A1O00337 649 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 RAD51DO75771 328 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 IFI6P09912 130 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 COX4I1P13073 169 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 APEX1P27695 318 aaKnown RBP9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 GABRA3P34903 492 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 RFX3P48380 749 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 PRIM2P49643 509 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 CHN2P52757 468 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 PSMA6P60900 246 aaKnown RBP9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 STX1BP61266 288 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 RPL38P63173 70 aaKnown RBP9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 MXRA7P84157 204 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 CHRNEQ04844 493 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 RASGEF1BQ0VAM2 473 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 FOXF1Q12946 379 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 GABRA6Q16445 453 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 CARTPTQ16568 116 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 ATP6AP1LQ52LC2 224 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 RINLQ6ZS11 566 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 ZAR1Q86SH2 424 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 SNX32Q86XE0 403 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 GATSQ8NAP1 163 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 FNDC5Q8NAU1 212 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 OR9I1Q8NGQ6 314 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 ZNF418Q8TF45 676 aaPredicted RBP9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 C16orf78Q8WTQ4 265 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 ZNF775Q96BV0 537 aaPredicted RBP9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 ELP4Q96EB1 424 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 FBXO17Q96EF6 278 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 MRGPRX4Q96LA9 322 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 ACPTQ9BZG2 426 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 GIMAP4Q9NUV9 329 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 NMRK1Q9NWW6 199 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 TAS2R7Q9NYW3 318 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 VPS29Q9UBQ0 182 aa9.92□□□□□ -0.82
SUPT16H-202ENST00000552829 NPIPA5A0A0B4J1W7 369 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 LOC100653049A0A140TA62 436 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 A0A1W2PR80 420 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 A6NJY4 79 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 NPIPA7E9PJI5 369 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 TRIM77I1YAP6 450 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 LSM1O15116 133 aaKnown RBP9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 ULK1O75385 1050 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 KRT34O76011 436 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 NPIPA8P0DM63 369 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 PCMT1P22061 227 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 CALB2P22676 271 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 NTF4P34130 210 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 ATP4BP51164 291 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 FOXG1P55316 489 aaPredicted RBP9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 HEPACAMQ14CZ8 416 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 ZNHIT3Q15649 155 aaPredicted RBP9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 MIDNQ504T8 468 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 AGKQ53H12 422 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 C6orf136Q5SQH8 315 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 METTL21CQ5VZV1 264 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 FBXW9Q5XUX1 488 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 SHISA2Q6UWI4 295 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 TMEM107Q6UX40 140 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 TREML4Q6UXN2 200 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 SPATA19Q7Z5L4 167 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 GALNT5Q7Z7M9 940 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 MISPQ8IVT2 679 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 ZNF100Q8IYN0 542 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 B4GALNT2Q8NHY0 566 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 FBXO27Q8NI29 283 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 ZFP90Q8TF47 636 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 PIK3R3Q92569 461 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 ZNF524Q96C55 264 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 SH3YL1Q96HL8 342 aaPredicted RBP9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 PPP3R2Q96LZ3 170 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 BBS4Q96RK4 519 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 C1QTNF6Q9BXI9 259 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 GLIPR2Q9H4G4 154 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 C3orf14Q9HBI5 128 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 AIG1Q9NVV5 245 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 PCDHB10Q9UN67 800 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 SPEF1Q9Y4P9 236 aa9.91□□□□□ -0.82
SUPT16H-202ENST00000552829 PCDHGB1Q9Y5G3 927 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms