RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 C6orf120Q7Z4R8 191 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 IFT20Q8IY31 132 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 DNAJA3Q96EY1 480 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 ARL5BQ96KC2 179 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 SLC35G5Q96KT7 338 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 FOXN4Q96NZ1 517 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 NAA11Q9BSU3 229 aaPredicted RBP12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 C1orf50Q9BV19 199 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 DUSP26Q9BV47 211 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 GATA5Q9BWX5 397 aaPredicted RBP12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 ZNF350Q9GZX5 532 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 C12orf65Q9H3J6 166 aaKnown RBP12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 SLC7A10Q9NS82 523 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 GIMAP2Q9UG22 337 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 MOKQ9UQ07 419 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 TRAPPC4Q9Y296 219 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 TENM1Q9UKZ4 2725 aa12.4□□□□□ -0.42
CHMP1A-210ENST00000551981 CENPVL1A0A0U1RR11 272 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 TMEM233B4DJY2 109 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 AGR2O95994 175 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 MPGP29372 298 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 PGM1P36871 562 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 SERPINF1P36955 418 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 HBA1P69905 142 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 ATAD3BQ5T9A4 648 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 IL23RQ5VWK5 629 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 SPATA19Q7Z5L4 167 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 KRTCAP2Q8N6L1 136 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 FNDC5Q8NAU1 212 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 FAM71CQ8NEG0 241 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 DDIT4LQ96D03 193 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 OR11A1Q9GZK7 315 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 OBP2BQ9NPH6 170 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 POLE3Q9NRF9 147 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 FBXO9Q9UK97 447 aaPredicted RBP12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 PCDHGB4Q9UN71 923 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 FLVCR1Q9Y5Y0 555 aa12.39□□□□□ -0.43
CHMP1A-210ENST00000551981 RNF103-CHMP3A0A140T963 221 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 B9A039 149 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 ERCC1P07992 297 aaPredicted RBP12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 GUSBP08236 651 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 KRT4P19013 534 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 CCNA2P20248 432 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 PAX7P23759 505 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 SRP14P37108 136 aaKnown RBP12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 H3F3AP84243 136 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 RUNX1T1Q06455 604 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 PCLAFQ15004 111 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 UGT3A2Q3SY77 523 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 XKR7Q5GH72 579 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 TSPO2Q5TGU0 170 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 EMBQ6PCB8 327 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 ABHD12BQ7Z5M8 362 aaPredicted RBP12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 ADGRG3Q86Y34 549 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 ARFGAP2Q8N6H7 521 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 ANKS4BQ8N8V4 417 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 POMGNT2Q8NAT1 580 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 PMM1Q92871 262 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 C16orf45Q96MC5 204 aaPredicted RBP12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 BPESC1Q9GZL8 116 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 RAB1BQ9H0U4 201 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 SERHL2Q9H4I8 314 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 EXOSC3Q9NQT5 275 aaKnown RBP12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 WDR45Q9Y484 360 aa12.38□□□□□ -0.43
CHMP1A-210ENST00000551981 ZNF208O43345 1280 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 NPHS1O60500 1241 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 PDE5AO76074 875 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 SNUPNO95149 360 aaKnown RBP12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 SLU7O95391 586 aaKnown RBP12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 CRYAAP02489 173 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 CHRNGP07510 517 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 CDH2P19022 906 aaPredicted RBP12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 PPOXP50336 477 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 CHN2P52757 468 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 HPCAP84074 193 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 SLC17A1Q14916 467 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 MAPK14Q16539 360 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 PGS1Q32NB8 556 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 HIKESHIQ53FT3 197 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 C6orf136Q5SQH8 315 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 C12orf54Q6X4T0 127 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 OLIG3Q7RTU3 272 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 MEX3DQ86XN8 651 aaKnown RBP12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 RIMKLAQ8IXN7 391 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 AGR3Q8TD06 166 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 HPS1Q92902 700 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 TMEM45BQ96B21 275 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 SLC38A2Q96QD8 506 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 KATNB1Q9BVA0 655 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 OR51I1Q9H343 314 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 PPCSQ9HAB8 311 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 CA10Q9NS85 328 aa12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.37□□□□□ -0.43
CHMP1A-210ENST00000551981 TMED7-TICAM2A0A0A6YYA0 188 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 IGHV1-18A0A0C4DH31 117 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 KLF11O14901 512 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 KRT33AO76009 404 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 OR4A8P0C604 315 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 FAM153BP0C7A2 387 aa12.36□□□□□ -0.43
CHMP1A-210ENST00000551981 ITGA2P17301 1181 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms