RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CLUP10909 449 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 ZNF182P17025 639 aaPredicted RBP17.91■□□□□ 0.46
SSH1-209ENST00000551165 TGM1P22735 817 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 GRK5P34947 590 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 C3orf38Q5JPI3 329 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 C10orf53Q8N6V4 93 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 OR4F15Q8NGB8 312 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 B4GALNT2Q8NHY0 566 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 FCGR1BQ92637 280 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 LIN37Q96GY3 246 aaPredicted RBP17.91■□□□□ 0.46
SSH1-209ENST00000551165 CDC6Q99741 560 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 ZNF160Q9HCG1 818 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 MED17Q9NVC6 651 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 MED11Q9P086 117 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 LSM2Q9Y333 95 aaKnown RBP17.91■□□□□ 0.46
SSH1-209ENST00000551165 IMPA2O14732 288 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 FOXD2O60548 495 aaPredicted RBP17.91■□□□□ 0.46
SSH1-209ENST00000551165 DKK1O94907 266 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 NFATC3Q12968 1075 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 ZNF74Q16587 644 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 ARMCX4Q5H9R4 360 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 HES3Q5TGS1 186 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 RPL13AP3Q6NVV1 102 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 ZBTB46Q86UZ6 589 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 TMEM43Q9BTV4 400 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 TEX12Q9BXU0 123 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 CMC2Q9NRP2 79 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 PCSK5Q92824 1860 aa17.91■□□□□ 0.46
SSH1-209ENST00000551165 PRR33A8MZF0 331 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 PGCP20142 388 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 PTGDSP41222 190 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 RPS5P46782 204 aaKnown RBP17.9■□□□□ 0.46
SSH1-209ENST00000551165 CBFBQ13951 182 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 CRMP1Q14194 572 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 P2RY8Q86VZ1 359 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 TAAR8Q969N4 342 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 TMCO6Q96DC7 493 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 ERMAPQ96PL5 475 aaPredicted RBP17.9■□□□□ 0.46
SSH1-209ENST00000551165 MMP25Q9NPA2 562 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 TCFL5Q9UL49 500 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 AHCTF1Q8WYP5 2266 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 NOL3O60936 208 aaKnown RBP17.9■□□□□ 0.46
SSH1-209ENST00000551165 ITGA10O75578 1167 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 GABARAPO95166 117 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 OTX2P32243 289 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 CD79BP40259 229 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 SOX3P41225 446 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 VBP1P61758 197 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 TRIP6Q15654 476 aaKnown RBP17.9■□□□□ 0.46
SSH1-209ENST00000551165 CSRP2Q16527 193 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 NXNL2Q5VZ03 156 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 PPP1R32Q7Z5V6 425 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 GHDCQ8N2G8 530 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 PRSS33Q8NF86 280 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 SLC19A3Q9BZV2 496 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 GPN2Q9H9Y4 310 aaPredicted RBP17.9■□□□□ 0.46
SSH1-209ENST00000551165 MRPS18AQ9NVS2 196 aaKnown RBP17.9■□□□□ 0.46
SSH1-209ENST00000551165 DIMT1Q9UNQ2 313 aaKnown RBP17.9■□□□□ 0.46
SSH1-209ENST00000551165 PCDHGA3Q9Y5H0 932 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 IER3IP1Q9Y5U9 82 aa17.9■□□□□ 0.46
SSH1-209ENST00000551165 BLOC1S5-TXNDC5H3BN57 136 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 NDUFB2O95178 105 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 F8A1P23610 371 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 SLC6A6P31641 620 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 AQP2P41181 271 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 NCS1P62166 190 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 SOWAHCQ53LP3 525 aaPredicted RBP17.89■□□□□ 0.45
SSH1-209ENST00000551165 ARSKQ6UWY0 536 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 ADGRG3Q86Y34 549 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 CRELD1Q96HD1 420 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 MGLLQ99685 303 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 DDA1Q9BW61 102 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 SEC14L4Q9UDX3 406 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 CHRNA9Q9UGM1 479 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 ZNF337Q9Y3M9 751 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 CPAMD8Q8IZJ3 1885 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 RAB36O95755 333 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 GYPBP06028 91 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 FBXO45P0C2W1 286 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 PEPDP12955 493 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 GP1BBP13224 206 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 HIST1H1CP16403 213 aaKnown RBP17.89■□□□□ 0.45
SSH1-209ENST00000551165 CXCR1P25024 350 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 RPS4XP62701 263 aaKnown RBP17.89■□□□□ 0.45
SSH1-209ENST00000551165 PSPHP78330 225 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 ITGADQ13349 1161 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 NIPAL3Q6P499 406 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 NUP54Q7Z3B4 507 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 ALDH16A1Q8IZ83 802 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 GALNT15Q8N3T1 639 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 NANOGP1Q8N7R0 232 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 SLC37A3Q8NCC5 494 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 OR4K13Q8NH42 304 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 C9orf43Q8TAL5 461 aaPredicted RBP17.89■□□□□ 0.45
SSH1-209ENST00000551165 NDNFQ8TB73 568 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 RNF138Q8WVD3 245 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 KLHL1Q9NR64 748 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 TAS2R10Q9NYW0 307 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 KLRF1Q9NZS2 232 aa17.89■□□□□ 0.45
SSH1-209ENST00000551165 EML6Q6ZMW3 1958 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms