RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 C12orf10Q9HB07 376 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 MCCC2Q9HCC0 563 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 FANCFQ9NPI8 374 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 PLSCR4Q9NRQ2 329 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 CRIM1Q9NZV1 1036 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 TMEM181Q9P2C4 612 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 TESQ9UGI8 421 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 SLC13A4Q9UKG4 626 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 TRAPPC4Q9Y296 219 aa13.75□□□□□ -0.21
PRPF40B-211ENST00000551063 CSMD1Q96PZ7 3565 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 FRS3O43559 492 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 CXCR1P25024 350 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 GNGT1P63211 74 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 PDK3Q15120 406 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 RABL3Q5HYI8 236 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 ERICH5Q6P6B1 374 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 C6orf89Q6UWU4 347 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 ARPINQ7Z6K5 226 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 CPLX4Q7Z7G2 160 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 MTDHQ86UE4 582 aaKnown RBP13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 STK32CQ86UX6 486 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 CALHM3Q86XJ0 350 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 LSMEM1Q8N8F7 131 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 RCN3Q96D15 328 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 ECSITQ9BQ95 431 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 RSPO3Q9BXY4 272 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 POTEKPQ9BYX7 375 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 TRIM2Q9C040 744 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 FAM107BQ9H098 131 aa13.74□□□□□ -0.21
PRPF40B-211ENST00000551063 IGHV3-15A0A0B4J1V0 119 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 ZNF724A8MTY0 619 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 TMEM229AB2RXF0 380 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 TPST1O60507 370 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 EIF1BO60739 113 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 GOSR1O95249 250 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 C8BP07358 591 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 YES1P07947 543 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 COX4I1P13073 169 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 POU2F1P14859 743 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 CCNA2P20248 432 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 RGS8P57771 180 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 NCALDP61601 193 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 SLC35A1P78382 337 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 DMTNQ08495 405 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 RASGEF1BQ0VAM2 473 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 SNTB1Q13884 538 aaKnown RBP13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 VEZF1Q14119 521 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 GLIPR1L2Q4G1C9 344 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 CCDC80Q76M96 950 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 ATG4DQ86TL0 474 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 COMTD1Q86VU5 262 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 TUSC5Q8IXB3 177 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 POU5F2Q8N7G0 328 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 ZNF610Q8N9Z0 462 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 PIGXQ8TBF5 258 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 DACH2Q96NX9 599 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 MYLK2Q9H1R3 596 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 RPS6KB2Q9UBS0 482 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 ING1Q9UK53 422 aaPredicted RBP13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 AP3M1Q9Y2T2 418 aa13.73□□□□□ -0.21
PRPF40B-211ENST00000551063 IGKV3D-15A0A087WSY6 115 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 ZC3H12DA2A288 527 aaKnown RBP13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 A8MVM7 634 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 FAM220BPB1ANY3 271 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 M0QX08 132 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 NPIPB7O75200 414 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 GCM2O75603 506 aaPredicted RBP13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 EPXP11678 715 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 IMPDH2P12268 514 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 KLK2P20151 261 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 HTR2AP28223 471 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 CCKARP32238 428 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 IDUAP35475 653 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 KCNJ5P48544 419 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 SLC16A1P53985 500 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 GYS2P54840 703 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 OR2B6P58173 313 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 HOXC5Q00444 222 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 FAM27E3Q08E93 113 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 DAZAP2Q15038 168 aaPredicted RBP13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 C5orf46Q6UWT4 87 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 TFAP2EQ6VUC0 442 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 BEND4Q6ZU67 534 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 TREML1Q86YW5 311 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 SMYD1Q8NB12 490 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 OR52E4Q8NGH9 312 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 STK35Q8TDR2 534 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 DNAJA4Q8WW22 397 aaPredicted RBP13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 RASSF5Q8WWW0 418 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 EMC3Q9P0I2 261 aa13.72□□□□□ -0.21
PRPF40B-211ENST00000551063 A0A1B0GWA3 101 aa13.71□□□□□ -0.21
PRPF40B-211ENST00000551063 FAM221AA4D161 298 aa13.71□□□□□ -0.21
PRPF40B-211ENST00000551063 SH3D21A4FU49 640 aa13.71□□□□□ -0.21
PRPF40B-211ENST00000551063 LIPT2A6NK58 231 aa13.71□□□□□ -0.21
PRPF40B-211ENST00000551063 ZNF716A6NP11 495 aa13.71□□□□□ -0.21
PRPF40B-211ENST00000551063 C16orf97H3BN30 126 aa13.71□□□□□ -0.21
PRPF40B-211ENST00000551063 FMO6PO60774 539 aa13.71□□□□□ -0.21
PRPF40B-211ENST00000551063 LGI1O95970 557 aa13.71□□□□□ -0.21
PRPF40B-211ENST00000551063 OPN1SWP03999 348 aa13.71□□□□□ -0.21
PRPF40B-211ENST00000551063 GPIP06744 558 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms