RNA–Protein interactions for RNA: ENST00000550283.1

RAB5B-208, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5B, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-208ENST00000550283 ME2P23368 584 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 AGTR1P30556 359 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 UQCRC1P31930 480 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 APOBEC1P41238 236 aaKnown RBP9.99□□□□□ -0.81
RAB5B-208ENST00000550283 KCNJ5P48544 419 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 ASCL1P50553 236 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 POLR2HP52434 150 aaKnown RBP9.99□□□□□ -0.81
RAB5B-208ENST00000550283 SLC7A2P52569 658 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 EEFSECP57772 596 aaKnown RBP9.99□□□□□ -0.81
RAB5B-208ENST00000550283 RPS3AP61247 264 aaKnown RBP9.99□□□□□ -0.81
RAB5B-208ENST00000550283 FAM27E3Q08E93 113 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 RBBP4Q09028 425 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 MAPRE2Q15555 327 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 NRF1Q16656 503 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 FBXL19-AS1Q494R0 122 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 WDR88Q6ZMY6 472 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 TMPPEQ6ZT21 453 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 CHMP1BQ7LBR1 199 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 ARMC8Q8IUR7 673 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 TUSC5Q8IXB3 177 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 DMRTC2Q8IXT2 367 aaPredicted RBP9.99□□□□□ -0.81
RAB5B-208ENST00000550283 OR6T1Q8NGN1 323 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 TMEM234Q8WY98 164 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 DTNBP1Q96EV8 351 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 ARHGDIGQ99819 225 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 PTDSS2Q9BVG9 487 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 SFXN3Q9BWM7 321 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 HHATLQ9HCP6 504 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 KLHL13Q9P2N7 655 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 SEC14L4Q9UDX3 406 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 ZNF232Q9UNY5 417 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 CORO2BQ9UQ03 480 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 ANGPT4Q9Y264 503 aa9.99□□□□□ -0.81
RAB5B-208ENST00000550283 TMEM247A6NEH6 219 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 ZNF716A6NP11 495 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 NPIPB7O75200 414 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 SMNDC1O75940 238 aaKnown RBP eCLIP9.98□□□□□ -0.819e-9■■□□□ 12.3
RAB5B-208ENST00000550283 LGI1O95970 557 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 HOXB1P14653 301 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-208ENST00000550283 NQO1P15559 274 aaKnown RBP9.98□□□□□ -0.81
RAB5B-208ENST00000550283 SLC7A1P30825 629 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 OPRM1P35372 400 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 NUDT2P50583 147 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 P2RY4P51582 365 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 LIPEQ05469 1076 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 GNA13Q14344 377 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 TSC22D1Q15714 1073 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 FBXW10Q5XX13 1052 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 WBP2NLQ6ICG8 309 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 CCDC80Q76M96 950 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 FCRLAQ7L513 359 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 WDFY1Q8IWB7 410 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 MCEMP1Q8IX19 187 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 VANGL1Q8TAA9 524 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-208ENST00000550283 LINC01560Q8TB33 94 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 RNASE6Q93091 150 aaKnown RBP9.98□□□□□ -0.81
RAB5B-208ENST00000550283 KTI12Q96EK9 354 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-208ENST00000550283 REXO5Q96IC2 774 aaKnown RBP9.98□□□□□ -0.81
RAB5B-208ENST00000550283 RAB3IPQ96QF0 476 aaPredicted RBP9.98□□□□□ -0.81
RAB5B-208ENST00000550283 SPOCK3Q9BQ16 436 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 PSD2Q9BQI7 771 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 C12orf49Q9H741 205 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 CHST11Q9NPF2 352 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 CRIM1Q9NZV1 1036 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 POLQO75417 2590 aa9.98□□□□□ -0.81
RAB5B-208ENST00000550283 FAM220BPB1ANY3 271 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 LRRN3E7EW58 273 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 SULT2B1O00204 365 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 SYNGR4O95473 234 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 NPPAP01160 153 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 COX6B1P14854 86 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 NCK1P16333 377 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 FPR1P21462 350 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 CPOXP36551 454 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 GSK3BP49841 420 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 RASSF2P50749 326 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 FOXG1P55316 489 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-208ENST00000550283 OR2B6P58173 313 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 RAC3P60763 192 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 PSME3P61289 254 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 H3F3AP84243 136 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 LTBQ06643 244 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 SF3B4Q15427 424 aaKnown RBP eCLIP9.97□□□□□ -0.813e-6■■■■□ 22.5
RAB5B-208ENST00000550283 OR1Q1Q15612 314 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 ABLIM2Q6H8Q1 611 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 FAM214BQ7L5A3 538 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 ZNF550Q7Z398 422 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 TSEN54Q7Z6J9 526 aaKnown RBP9.97□□□□□ -0.81
RAB5B-208ENST00000550283 KRT73Q86Y46 540 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 ZNF440Q8IYI8 595 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 MICU2Q8IYU8 434 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 RNF148Q8N7C7 305 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 PCYOX1LQ8NBM8 494 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 FAM156AQ8NDB6 213 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 RBM15BQ8NDT2 890 aaKnown RBP9.97□□□□□ -0.81
RAB5B-208ENST00000550283 CPNE4Q96A23 557 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-208ENST00000550283 GMPPAQ96IJ6 420 aaPredicted RBP9.97□□□□□ -0.81
RAB5B-208ENST00000550283 ZFP3Q96NJ6 502 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 ZNF607Q96SK3 696 aa9.97□□□□□ -0.81
RAB5B-208ENST00000550283 ECSITQ9BQ95 431 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms