RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 FNDC5Q8NAU1 212 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 OR52N5Q8NH56 324 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 OR5AK3PQ8NH89 298 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 PSMA8Q8TAA3 256 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 SLC35G5Q96KT7 338 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 ZNF300Q96RE9 604 aaPredicted RBP7.45□□□□□ -1.22
TROAP-208ENST00000548817 SDF2Q99470 211 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 NAA11Q9BSU3 229 aaPredicted RBP7.45□□□□□ -1.22
TROAP-208ENST00000548817 C1orf50Q9BV19 199 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 DUSP26Q9BV47 211 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 ZNF747Q9BV97 191 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 QRSL1Q9H0R6 528 aaKnown RBP7.45□□□□□ -1.22
TROAP-208ENST00000548817 TUBB1Q9H4B7 451 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 ACER3Q9NUN7 267 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 GPATCH2Q9NW75 528 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.45□□□□□ -1.22
TROAP-208ENST00000548817 UPB1Q9UBR1 384 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 METRNQ9UJH8 293 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 KCNE3Q9Y6H6 103 aa7.45□□□□□ -1.22
TROAP-208ENST00000548817 TLDC2A0PJX2 215 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 VWC2LB2RUY7 222 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 E7EQL1 145 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 NPIPB9F8W1W9 429 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 TRIM77I1YAP6 450 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 ALX3O95076 343 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 H6PDO95479 791 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 IGHV3-9P01782 118 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 UBTFL6P0CB48 400 aaPredicted RBP7.44□□□□□ -1.22
TROAP-208ENST00000548817 COX5AP20674 150 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 CD40P25942 277 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 RYKP34925 604 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 CLK1P49759 484 aaKnown RBP7.44□□□□□ -1.22
TROAP-208ENST00000548817 EFNA4P52798 201 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 OR2B6P58173 313 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 HPCAP84074 193 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 PTGR1Q14914 329 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 ZNF141Q15928 474 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 C6orf136Q5SQH8 315 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 C11orf71Q6IPW1 123 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 VPS37AQ8NEZ2 397 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 OR5D16Q8NGK9 328 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 AGR3Q8TD06 166 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 ZNF418Q8TF45 676 aaPredicted RBP7.44□□□□□ -1.22
TROAP-208ENST00000548817 TUBGCP3Q96CW5 907 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 COQ8BQ96D53 544 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 KCNS3Q9BQ31 491 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 INPP5KQ9BT40 448 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 PRR14Q9BWN1 585 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 C1QTNF6Q9BXI9 259 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 OCEL1Q9H607 264 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 TAS2R16Q9NYV7 291 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 NPAP1Q9NZP6 1156 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 CHRNA9Q9UGM1 479 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 ING1Q9UK53 422 aaPredicted RBP7.44□□□□□ -1.22
TROAP-208ENST00000548817 MKLN1Q9UL63 735 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 SLC35A3Q9Y2D2 325 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 AMDHD2Q9Y303 409 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 HDGFL3Q9Y3E1 203 aa7.44□□□□□ -1.22
TROAP-208ENST00000548817 IGKV3D-15A0A087WSY6 115 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 GOLGA8QA0A0J9YX86 632 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 RNF103-CHMP3A0A140T963 221 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 A0A1W2PR80 420 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 GOLGA8OA6NCC3 632 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 TMEM233B4DJY2 109 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 GOLGA8NF8WBI6 632 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 ETV2O00321 342 aaPredicted RBP7.43□□□□□ -1.22
TROAP-208ENST00000548817 DNPH1O43598 174 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 EIF1BO60739 113 aaKnown RBP7.43□□□□□ -1.22
TROAP-208ENST00000548817 SASH3O75995 380 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 KRT33AO76009 404 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 PMS2P2O95744 297 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 WNT11O96014 354 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 CHRNGP07510 517 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 CCNA2P20248 432 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 ALDH3A1P30838 453 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 APOBEC3AP31941 199 aaPredicted RBP7.43□□□□□ -1.22
TROAP-208ENST00000548817 SERPINB5P36952 375 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 HTR3AP46098 478 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 PDLIM4P50479 330 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 RPS26P62854 115 aaKnown RBP7.43□□□□□ -1.22
TROAP-208ENST00000548817 SLC35A1P78382 337 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 SKP2Q13309 424 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 GGTLC2Q14390 218 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 PCLAFQ15004 111 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 CARTPTQ16568 116 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 ARHGAP11BQ3KRB8 267 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 AWAT1Q58HT5 328 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 C1QTNF12Q5T7M4 302 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 ABLIM2Q6H8Q1 611 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 CASP12Q6UXS9 341 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 USP43Q70EL4 1123 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 GRINAQ7Z429 371 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 CROCCP2Q86T23 111 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 ARFGAP2Q8N6H7 521 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 KRTCAP2Q8N6L1 136 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 OR4A15Q8NGL6 344 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 XAGE5Q8WWM1 108 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 OIT3Q8WWZ8 545 aa7.43□□□□□ -1.22
TROAP-208ENST00000548817 ZNF75CPQ92670 426 aaPredicted RBP7.43□□□□□ -1.22
TROAP-208ENST00000548817 PMM1Q92871 262 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms