RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 SLC25A3Q00325 362 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 ARHGAP11BQ3KRB8 267 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 KRT71Q3SY84 523 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 FAM120AOSQ5T036 256 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 ABLIM2Q6H8Q1 611 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 FAM166AQ6J272 317 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 ZNF544Q6NX49 715 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 TNFAIP8L2Q6P589 184 aaPredicted RBP10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 EIF3MQ7L2H7 374 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 ADGRG3Q86Y34 549 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 ANKS4BQ8N8V4 417 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 PSMA8Q8TAA3 256 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 SFXN5Q8TD22 340 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 PROX1Q92786 737 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 MOAP1Q96BY2 351 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 TUBGCP3Q96CW5 907 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 ZG16BQ96DA0 208 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 MSI2Q96DH6 328 aaKnown RBP10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 PKNOX2Q96KN3 472 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 NMUR2Q9GZQ4 415 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 FKRPQ9H9S5 495 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 SLC17A5Q9NRA2 495 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 SLC7A10Q9NS82 523 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 TMEM160Q9NX00 188 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 CHRNA9Q9UGM1 479 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 STAB1Q9NY15 2570 aa10.47□□□□□ -0.73
TRAFD1-205ENST00000548277 IGKV3D-15A0A087WSY6 115 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 RNF103-CHMP3A0A140T963 221 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 DUXAA6NLW8 204 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 H7C417 338 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 ETV2O00321 342 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 GPR171O14626 319 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 ITM2AO43736 263 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 KIAA0513O60268 411 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 PMS2P2O95744 297 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 TGFAP01135 160 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 BMP4P12644 408 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 PGM1P36871 562 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 IDH2P48735 452 aaKnown RBP10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 GZMKP49863 264 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 PHC1P78364 1004 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 PDK3Q15120 406 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 TSPO2Q5TGU0 170 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 OR7E24Q6IFN5 339 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 VHLLQ6RSH7 139 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 SSX8Q7RTT4 187 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 ANKRD46Q86W74 232 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 RIMKLAQ8IXN7 391 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 NATD1Q8N6N6 113 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 OR4A15Q8NGL6 344 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 PIGXQ8TBF5 258 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 SLC25A43Q8WUT9 341 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 ZBTB9Q96C00 473 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 SORCS2Q96PQ0 1159 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 PIMREGQ9BSJ6 248 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 CCDC106Q9BWC9 280 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 PRR14Q9BWN1 585 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 PARD6BQ9BYG5 372 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 BHLHE41Q9C0J9 482 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 EXD2Q9NVH0 621 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 WDR45Q9Y484 360 aa10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 SPIN1Q9Y657 262 aaPredicted RBP10.46□□□□□ -0.73
TRAFD1-205ENST00000548277 IGHV4-61A0A0C4DH41 118 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 TMEM72A0PK05 275 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 AP3D1O14617 1153 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 RGS16O15492 202 aaPredicted RBP10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 DNAJA2O60884 412 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 C1QCP02747 245 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 CSF3P09919 207 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 IMPDH2P12268 514 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 PRPS1L1P21108 318 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 EMX2Q04743 252 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 CHI3L2Q15782 390 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 PDCD2Q16342 344 aaPredicted RBP10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 MST1LQ2TV78 715 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 GPAT3Q53EU6 434 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 HIKESHIQ53FT3 197 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 TYW3Q6IPR3 259 aaKnown RBP10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 BHLHB9Q6PI77 547 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 GRINAQ7Z429 371 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 SPATA19Q7Z5L4 167 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 MREGQ8N565 214 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 ARFGAP2Q8N6H7 521 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 TMEM181Q9P2C4 612 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 PCDHGB4Q9UN71 923 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 AMDHD2Q9Y303 409 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 HDGFL3Q9Y3E1 203 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 FLVCR1Q9Y5Y0 555 aa10.45□□□□□ -0.74
TRAFD1-205ENST00000548277 SVEP1Q4LDE5 3571 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 TMED7-TICAM2A0A0A6YYA0 188 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 LRP5LA4QPB2 252 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 VWC2LB2RUY7 222 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 ANKRD28O15084 1053 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 KRT33AO76009 404 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 SERPINE1P05121 402 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 NR4A2P43354 598 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 CLDN8P56748 225 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 PRPS1P60891 318 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 ABCE1P61221 599 aaKnown RBP10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 TUBA1BP68363 451 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms