RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 SLC16A1P53985 500 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 MAGOHP61326 146 aaKnown RBP11.76□□□□□ -0.53
CPSF6-204ENST00000547486 EPS8Q12929 822 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 MRPL2Q5T653 305 aaKnown RBP11.76□□□□□ -0.53
CPSF6-204ENST00000547486 NXNQ6DKJ4 435 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 CROCCP2Q86T23 111 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 PRIMA1Q86XR5 153 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 CMIPQ8IY22 773 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 WDR60Q8WVS4 1066 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 APH1AQ96BI3 265 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 MUCL1Q96DR8 90 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 MAELQ96JY0 434 aaKnown RBP11.76□□□□□ -0.53
CPSF6-204ENST00000547486 OR52B2Q96RD2 323 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 ZBTB18Q99592 522 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 ADAM19Q9H013 955 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 CISD1Q9NZ45 108 aaKnown RBP11.76□□□□□ -0.53
CPSF6-204ENST00000547486 EMC3Q9P0I2 261 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 ZANQ9Y493 2812 aa11.76□□□□□ -0.53
CPSF6-204ENST00000547486 A0A1W2PR80 420 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 CFAP73A6NFT4 308 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 ZNF208O43345 1280 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 DNPH1O43598 174 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 NDUFS7O75251 213 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 MRPL33O75394 65 aaKnown RBP11.75□□□□□ -0.53
CPSF6-204ENST00000547486 IL6P05231 212 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 DBIP07108 87 aaKnown RBP11.75□□□□□ -0.53
CPSF6-204ENST00000547486 THBS1P07996 1170 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 TFPTP0C1Z6 253 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 GKN3PP0CG01 181 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 ETFAP13804 333 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 IL7RP16871 459 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 ACAA2P42765 397 aaKnown RBP11.75□□□□□ -0.53
CPSF6-204ENST00000547486 HTR3AP46098 478 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 POLR2HP52434 150 aaKnown RBP11.75□□□□□ -0.53
CPSF6-204ENST00000547486 SLC18A1P54219 525 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 TXNL4AP83876 142 aaKnown RBP11.75□□□□□ -0.53
CPSF6-204ENST00000547486 FAPQ12884 760 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 CLEC12BQ2HXU8 276 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 GTDC1Q4AE62 458 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 PDCD4Q53EL6 469 aaKnown RBP11.75□□□□□ -0.53
CPSF6-204ENST00000547486 P2RY8Q86VZ1 359 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 VRK2Q86Y07 508 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 GLB1L3Q8NCI6 653 aaPredicted RBP11.75□□□□□ -0.53
CPSF6-204ENST00000547486 MAPK1IP1LQ8NDC0 245 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 OR52E4Q8NGH9 312 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 OR52N5Q8NH56 324 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 PIGXQ8TBF5 258 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 SLC38A5Q8WUX1 472 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 ZHX1-C8orf76Q96EF9 292 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 MUS81Q96NY9 551 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 MANSC1Q9H8J5 431 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 SDR39U1Q9NRG7 319 aaPredicted RBP11.75□□□□□ -0.53
CPSF6-204ENST00000547486 CHST2Q9Y4C5 530 aa11.75□□□□□ -0.53
CPSF6-204ENST00000547486 A0A1W2PP18 115 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 CIB4A0PJX0 185 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 CDHR4A6H8M9 788 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 CCT8L1PA6NM43 557 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 INAFM1C9JVW0 142 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 RNF223E7ERA6 249 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 SLCO1B7G3V0H7 640 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 PDLIM1O00151 329 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 FAAHO00519 579 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 GPR171O14626 319 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 ABCD4O14678 606 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 KRT75O95678 551 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 IGHV4-39P01824 125 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 ITGA5P08648 1049 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 PRG2P13727 222 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 IDO1P14902 403 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 MAGEA8P43361 318 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 ANXA11P50995 505 aaKnown RBP11.74□□□□□ -0.53
CPSF6-204ENST00000547486 SLC35A1P78382 337 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 KRTAP1-1Q07627 177 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 SPOCK1Q08629 439 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 LRRC74AQ0VAA2 488 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 SLC17A1Q14916 467 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 GABRA6Q16445 453 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 ATG16L1Q676U5 607 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 ZNF836Q6ZNA1 936 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 PEX5LQ8IYB4 626 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 CLIP4Q8N3C7 705 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 ZIC4Q8N9L1 334 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 WDR31Q8NA23 367 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 OR9I1Q8NGQ6 314 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 OR52P1PQ8NH57 321 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 PMM1Q92871 262 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 GTPBP3Q969Y2 492 aaKnown RBP11.74□□□□□ -0.53
CPSF6-204ENST00000547486 VPS33AQ96AX1 596 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 TLCD1Q96CP7 247 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 DDIT4LQ96D03 193 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 TRMT61AQ96FX7 289 aaKnown RBP11.74□□□□□ -0.53
CPSF6-204ENST00000547486 AURKBQ96GD4 344 aaPredicted RBP11.74□□□□□ -0.53
CPSF6-204ENST00000547486 TRAF4Q9BUZ4 470 aaPredicted RBP11.74□□□□□ -0.53
CPSF6-204ENST00000547486 C1QTNF6Q9BXI9 259 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 TPT1P8Q9HAU6 139 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 TMBIM4Q9HC24 238 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 ASB6Q9NWX5 421 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 MALT1Q9UDY8 824 aa11.74□□□□□ -0.53
CPSF6-204ENST00000547486 GDF2Q9UK05 429 aaPredicted RBP11.74□□□□□ -0.53
CPSF6-204ENST00000547486 FLVCR1Q9Y5Y0 555 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms