RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 MLLT11Q13015 90 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 SPHARQ15513 63 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 SNAPC1Q16533 368 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 CLEC18BQ6UXF7 455 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 ZNF836Q6ZNA1 936 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 QSOX2Q6ZRP7 698 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 GDF7Q7Z4P5 450 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 OR4N5Q8IXE1 308 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 CLIP4Q8N3C7 705 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 CLEC18CQ8NCF0 446 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 CHPT1Q8WUD6 406 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 SNRNP40Q96DI7 357 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 COX4I2Q96KJ9 171 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 LMF1Q96S06 567 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 ZNF559Q9BR84 538 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 TAPBPLQ9BX59 468 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 OCEL1Q9H607 264 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 TCRBV16S1A1N1A0A5B0 115 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 CPSF4LA6NMK7 179 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 USP9YO00507 2555 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 KPNA4O00629 521 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 NR4A1P22736 598 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 GADD45AP24522 165 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 SOX6P35712 828 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 SOX18P35713 384 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 OPRL1P41146 370 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 COPZ1P61923 177 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 MED22Q15528 200 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 SYT14P1Q58G82 188 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 ACSM5Q6NUN0 579 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 H3F3CQ6NXT2 135 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 ZNF613Q6PF04 617 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 PAPD4Q6PIY7 484 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 TMCO5AQ8N6Q1 288 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 MCFD2Q8NI22 146 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 TM9SF4Q92544 642 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 ZNF582Q96NG8 517 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 QRSL1Q9H0R6 528 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 ADAP2Q9NPF8 381 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 FAIMQ9NVQ4 179 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 ETAA1Q9NY74 926 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 PLA2G3Q9NZ20 509 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 C19orf25Q9UFG5 118 aaPredicted RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 CFL2Q9Y281 166 aa15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 LSM2Q9Y333 95 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 EXOSC1Q9Y3B2 195 aaKnown RBP15.78■□□□□ 0.12
RBFOX1-207ENST00000547338 UTP20O75691 2785 aaKnown RBP15.77■□□□□ 0.12
RBFOX1-207ENST00000547338 HIVEP3Q5T1R4 2406 aa15.77■□□□□ 0.12
RBFOX1-207ENST00000547338 TMEM129A0AVI4 362 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 HTR3EA5X5Y0 456 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 CDHR4A6H8M9 788 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 SAGE2PA6NJ88 616 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 KDM4EB2RXH2 506 aaPredicted RBP15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 OR10H2O60403 315 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 DRD5P21918 477 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 PSMA1P25786 263 aaKnown RBP15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 PTGER1P34995 402 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 ZNF136P52737 540 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 TMED1Q13445 227 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 RGS21Q2M5E4 152 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 BTBD16Q32M84 506 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 CMIPQ8IY22 773 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 CDK20Q8IZL9 346 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 VWA5B2Q8N398 1253 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 CISD2Q8N5K1 135 aaKnown RBP15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 GPR151Q8TDV0 419 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 RBM18Q96H35 190 aaKnown RBP15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 LRR1Q96L50 414 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 PTCHD1Q96NR3 888 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 ASF1BQ9NVP2 202 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 GPR55Q9Y2T6 319 aaPredicted RBP15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 PEX16Q9Y5Y5 336 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 CDH10Q9Y6N8 788 aa15.77■□□□□ 0.11
RBFOX1-207ENST00000547338 METTL15A6NJ78 407 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 MYL12BO14950 172 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 PRKYO43930 277 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 LDB3O75112 727 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 MYL12AP19105 171 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 TRHRP34981 398 aaPredicted RBP15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 PPP5CP53041 499 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 HSD17B7P56937 341 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 SLC26A5P58743 744 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 LSM3P62310 102 aaKnown RBP15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 ZNF45Q02386 682 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 SERTAD2Q14140 314 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 GPR68Q15743 365 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 ARMC4Q5T2S8 1044 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 FCRLBQ6BAA4 426 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 OLIG3Q7RTU3 272 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 KIF18BQ86Y91 864 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 GALNT12Q8IXK2 581 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 SLC34A3Q8N130 599 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 NFAM1Q8NET5 270 aaPredicted RBP15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 GPA33Q99795 319 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 JAM3Q9BX67 310 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 TMEM27Q9HBJ8 222 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 MMP25Q9NPA2 562 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 DNAJC27Q9NZQ0 273 aa15.76■□□□□ 0.11
RBFOX1-207ENST00000547338 SPTAN1Q13813 2472 aaKnown RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms