RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 HSH2DQ96JZ2 352 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 ARL5BQ96KC2 179 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 THTPAQ9BU02 230 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 SRXN1Q9BYN0 137 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 HDGFL3Q9Y3E1 203 aa18.36■□□□□ 0.53
HMGA2-211ENST00000545998 A0A0G2JNJ9 132 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 ZC3H12DA2A288 527 aaKnown RBP18.35■□□□□ 0.53
HMGA2-211ENST00000545998 CPSF4LA6NMK7 179 aaKnown RBP18.35■□□□□ 0.53
HMGA2-211ENST00000545998 TFPIP10646 304 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 SMSP52788 366 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 CDH12P55289 794 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 MYBPHQ13203 477 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 TMPPEQ6ZT21 453 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 SLC38A4Q969I6 547 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 SLC47A1Q96FL8 570 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 CLPTM1LQ96KA5 538 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 TM9SF2Q99805 663 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 TIGARQ9NQ88 270 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 Q9UFV3 132 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 SAMD4AQ9UPU9 718 aaKnown RBP18.35■□□□□ 0.53
HMGA2-211ENST00000545998 RNF6Q9Y252 685 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 CACNA1CQ13936 2221 aa18.35■□□□□ 0.53
HMGA2-211ENST00000545998 ELOA3DA6NLF2 546 aaPredicted RBP18.34■□□□□ 0.53
HMGA2-211ENST00000545998 A8MVM7 634 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 NPIPB7O75200 414 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 ATP5HO75947 161 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 RCBTB2O95199 551 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 THY1P04216 161 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 PNMTP11086 282 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 DIO1P49895 249 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 RAC3P60763 192 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 ZNF239Q16600 458 aaKnown RBP18.34■□□□□ 0.53
HMGA2-211ENST00000545998 ELOA3BQ3SY89 546 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 SWT1Q5T5J6 900 aaKnown RBP18.34■□□□□ 0.53
HMGA2-211ENST00000545998 MRGPRGQ86SM5 289 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 NAXEQ8NCW5 288 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 ELOA3Q8NG57 546 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 ADAMTS16Q8TE57 1224 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 GEMIN6Q8WXD5 167 aaKnown RBP18.34■□□□□ 0.53
HMGA2-211ENST00000545998 CPNE4Q96A23 557 aaPredicted RBP18.34■□□□□ 0.53
HMGA2-211ENST00000545998 POTEKPQ9BYX7 375 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 ACTR3BQ9P1U1 418 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 MCTS1Q9ULC4 181 aaKnown RBP18.34■□□□□ 0.53
HMGA2-211ENST00000545998 PTPN13Q12923 2485 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 A0A087WUJ7 227 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 SULT2B1O00204 365 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 LYPD3O95274 346 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 SYNGR4O95473 234 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 PMS2P2O95744 297 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 IL2RAP01589 272 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 AGAP20933 346 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 TRIM25Q14258 630 aaKnown RBP18.34■□□□□ 0.53
HMGA2-211ENST00000545998 IFI44LQ53G44 452 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 DEF8Q6ZN54 512 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 P4HA3Q7Z4N8 544 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 ZNF808Q8N4W9 903 aaPredicted RBP18.34■□□□□ 0.53
HMGA2-211ENST00000545998 STK35Q8TDR2 534 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 DNAJA3Q96EY1 480 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 NSMCE2Q96MF7 247 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 AMBRA1Q9C0C7 1298 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 POLR2J2Q9GZM3 115 aaKnown RBP18.34■□□□□ 0.53
HMGA2-211ENST00000545998 POLR2J3Q9H1A7 115 aaKnown RBP18.34■□□□□ 0.53
HMGA2-211ENST00000545998 RNF122Q9H9V4 155 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 SELENONQ9NZV5 590 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 TRAPPC4Q9Y296 219 aa18.34■□□□□ 0.53
HMGA2-211ENST00000545998 TRAPPC13A5PLN9 417 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 HSPB2A8KAH6 182 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 AQP8O94778 261 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 FCGR2AP12318 317 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 CSNK2A1P68400 391 aaPredicted RBP18.33■□□□□ 0.52
HMGA2-211ENST00000545998 MS4A2Q01362 244 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 EGR4Q05215 589 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 HSPB2Q16082 182 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 FKBP9P1Q75LS8 142 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 CCDC71Q8IV32 467 aaPredicted RBP18.33■□□□□ 0.52
HMGA2-211ENST00000545998 FAM86B1Q8N7N1 296 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 ZFP3Q96NJ6 502 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 MUC13Q9H3R2 512 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 COQ3Q9NZJ6 369 aa18.33■□□□□ 0.52
HMGA2-211ENST00000545998 ICE1Q9Y2F5 2266 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 IGKV1D-42A0A075B6H8 117 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 CHP2O43745 196 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 DNAJC8O75937 253 aaPredicted RBP18.32■□□□□ 0.52
HMGA2-211ENST00000545998 PRKD3O94806 890 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 IFNW1P05000 195 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 IMPDH2P12268 514 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 ATP6V1B2P21281 511 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 CHRNB4P30926 498 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 RASSF2P50749 326 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 PPP4R4Q6NUP7 873 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 PGM2L1Q6PCE3 622 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 XKRXQ6PP77 449 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 LINC00114Q6XXX2 140 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 SDCCAG3Q96C92 435 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 PRRG4Q9BZD6 226 aa18.32■□□□□ 0.52
HMGA2-211ENST00000545998 GSC2O15499 205 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 OR5F1O95221 314 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 TMIGD3P0DMS9 266 aaPredicted RBP18.31■□□□□ 0.52
HMGA2-211ENST00000545998 TAS2R41P59536 307 aa18.31■□□□□ 0.52
HMGA2-211ENST00000545998 PIN1Q13526 163 aaPredicted RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms