RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 ATP6AP1LQ52LC2 224 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 SYT14P1Q58G82 188 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 DCST2Q5T1A1 773 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 C12orf54Q6X4T0 127 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 UBE2J2Q8N2K1 259 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 TOR1AIP2Q8NFQ8 470 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 OR52E4Q8NGH9 312 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 PSMA8Q8TAA3 256 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 ST8SIA1Q92185 356 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 FBXO17Q96EF6 278 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 PAIP2Q9BPZ3 127 aaKnown RBP11.2□□□□□ -0.62
USP28-212ENST00000544750 SLC17A5Q9NRA2 495 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 ZCCHC3Q9NUD5 404 aaKnown RBP11.2□□□□□ -0.62
USP28-212ENST00000544750 PNPOQ9NVS9 261 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 GPATCH2Q9NW75 528 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 KCNE5Q9UJ90 142 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 DCTN4Q9UJW0 460 aa11.2□□□□□ -0.62
USP28-212ENST00000544750 TRRAPQ9Y4A5 3859 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 SCAMP2O15127 329 aaKnown RBP11.19□□□□□ -0.62
USP28-212ENST00000544750 LILRA1O75019 489 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 SNUPNO95149 360 aaKnown RBP11.19□□□□□ -0.62
USP28-212ENST00000544750 TACSTD2P09758 323 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 GIFP27352 417 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 IL2RGP31785 369 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 ASMTP46597 345 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 COMPP49747 757 aaPredicted RBP11.19□□□□□ -0.62
USP28-212ENST00000544750 RPL14P50914 215 aaKnown RBP11.19□□□□□ -0.62
USP28-212ENST00000544750 SESN3P58005 492 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 FAM174BQ3ZCQ3 159 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 C1QTNF12Q5T7M4 302 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 IL23RQ5VWK5 629 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 RIMKLAQ8IXN7 391 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 C17orf78Q8N4C9 275 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 ANKS4BQ8N8V4 417 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 FNDC5Q8NAU1 212 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 C1orf162Q8NEQ5 155 aaPredicted RBP11.19□□□□□ -0.62
USP28-212ENST00000544750 SEMA6DQ8NFY4 1073 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 RFWD2Q8NHY2 731 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 ZFAND2BQ8WV99 257 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 TUBGCP3Q96CW5 907 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 MTERF3Q96E29 417 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 BOD1Q96IK1 185 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 PPP1R36Q96LQ0 422 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 THUMPD3Q9BV44 507 aaKnown RBP11.19□□□□□ -0.62
USP28-212ENST00000544750 ACTRT3Q9BYD9 372 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 LAT2Q9GZY6 243 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 AKTIPQ9H8T0 292 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 ASIC5Q9NY37 505 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 ATP6V1HQ9UI12 483 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 TMEFF2Q9UIK5 374 aaPredicted RBP11.19□□□□□ -0.62
USP28-212ENST00000544750 AMDHD2Q9Y303 409 aa11.19□□□□□ -0.62
USP28-212ENST00000544750 TGP01266 2768 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 LRP5LA4QPB2 252 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 GPR171O14626 319 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 MRPL33O75394 65 aaKnown RBP11.18□□□□□ -0.62
USP28-212ENST00000544750 VENTXO95231 258 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 PMS2P2O95744 297 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 UBL4AP11441 157 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 MAPK1P28482 360 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 H3F3AP84243 136 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 EMX2Q04743 252 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 IQCCQ4KMZ1 466 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 PDZK1Q5T2W1 519 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 CCDC103Q8IW40 242 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 KRTCAP2Q8N6L1 136 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 ZNF540Q8NDQ6 660 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 OR7A2PQ8NGA2 310 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 SLC25A43Q8WUT9 341 aaPredicted RBP11.18□□□□□ -0.62
USP28-212ENST00000544750 ARL5BQ96KC2 179 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 ATP6V1G3Q96LB4 118 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 SDF2Q99470 211 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 CCDC106Q9BWC9 280 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 NUF2Q9BZD4 464 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 BHLHE41Q9C0J9 482 aaPredicted RBP11.18□□□□□ -0.62
USP28-212ENST00000544750 NMUR2Q9GZQ4 415 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 VIPAS39Q9H9C1 493 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 MEAF6Q9HAF1 191 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 ACER3Q9NUN7 267 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 MOKQ9UQ07 419 aa11.18□□□□□ -0.62
USP28-212ENST00000544750 CENPVL1A0A0U1RR11 272 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 SERINC4A6NH21 518 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 SDHDO14521 159 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 DNPH1O43598 174 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 SASH3O75995 380 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 STAMBPO95630 424 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 LAMP1P11279 417 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 G6PDP11413 515 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 HPCAL1P37235 193 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 CCT3P49368 545 aaKnown RBP11.17□□□□□ -0.62
USP28-212ENST00000544750 CCR4P51679 360 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 SNRPD2P62316 118 aaKnown RBP11.17□□□□□ -0.62
USP28-212ENST00000544750 MERTKQ12866 999 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 ZNF141Q15928 474 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 SMU1Q2TAY7 513 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 DEF8Q6ZN54 512 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 HDXQ7Z353 690 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 TMCO5AQ8N6Q1 288 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 ZNF614Q8N883 585 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 FAM71CQ8NEG0 241 aa11.17□□□□□ -0.62
USP28-212ENST00000544750 PIGXQ8TBF5 258 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms