RNA–Protein interactions for RNA: ENST00000543872.6

SMG8-202, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMG8, Length 3,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-202ENST00000543872 KANTRA0A1W2PQU2 76 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 TXNL1O43396 289 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 ARL6IP5O75915 188 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 DDNO94850 711 aaPredicted RBP11.72□□□□□ -0.53
SMG8-202ENST00000543872 NDUFB6O95139 128 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 GP1BAP07359 652 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 CD63P08962 238 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 NFYBP25208 207 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 S100PP25815 95 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 P2RX1P51575 399 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 NRG3P56975 720 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 EEF1A1P68104 462 aaKnown RBP11.72□□□□□ -0.53
SMG8-202ENST00000543872 ELFN2Q5R3F8 820 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 EEF1A1P5Q5VTE0 462 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 BAIAP2L2Q6UXY1 529 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 BEND4Q6ZU67 534 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 USP53Q70EK8 1073 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 OR2W3Q7Z3T1 314 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 PLD4Q96BZ4 506 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 S100A16Q96FQ6 103 aaKnown RBP11.72□□□□□ -0.53
SMG8-202ENST00000543872 TEAD3Q99594 435 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 TRMT61BQ9BVS5 477 aaKnown RBP11.72□□□□□ -0.53
SMG8-202ENST00000543872 CHST6Q9GZX3 395 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 TREM1Q9NP99 234 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 PSMD9O00233 223 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 PPM1DO15297 605 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 ADAM12O43184 909 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 SLC25A12O75746 678 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 HMGN2P05204 90 aaKnown RBP11.72□□□□□ -0.53
SMG8-202ENST00000543872 BDKRB2P30411 391 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 PTH2RP49190 550 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 NCBP2P52298 156 aaKnown RBP eCLIP11.72□□□□□ -0.53
SMG8-202ENST00000543872 CYB5R2Q6BCY4 276 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 AMER3Q8N944 861 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 OR52L1Q8NGH7 329 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 OR8S1Q8NH09 359 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 ACOT11Q8WXI4 607 aaPredicted RBP11.72□□□□□ -0.53
SMG8-202ENST00000543872 LINC01599Q8WXQ3 324 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 RAD51AP1Q96B01 352 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 OTUB2Q96DC9 234 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 ALG14Q96F25 216 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 CAMK1GQ96NX5 476 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 MAP3K3Q99759 626 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 PINK1Q9BXM7 581 aa11.72□□□□□ -0.53
SMG8-202ENST00000543872 DOCK3Q8IZD9 2030 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 KIAA1671Q9BY89 1806 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 FEZF1A0PJY2 475 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 J3QRE1 110 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 ITGA10O75578 1167 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 IL5P05113 134 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 GPX4P36969 197 aaPredicted RBP11.71□□□□□ -0.53
SMG8-202ENST00000543872 CLDN2P57739 230 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 SNTB1Q13884 538 aaKnown RBP11.71□□□□□ -0.53
SMG8-202ENST00000543872 TAF13Q15543 124 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 TRAM1Q15629 374 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 PCGF3Q3KNV8 242 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 TMEM71Q6P5X7 295 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 HSD11B1LQ7Z5J1 315 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 RASGEF1AQ8N9B8 481 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 CHST14Q8NCH0 376 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 MYLIPQ8WY64 445 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.71□□□□□ -0.53
SMG8-202ENST00000543872 NOX4Q9NPH5 578 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 ASF1AQ9Y294 204 aa11.71□□□□□ -0.53
SMG8-202ENST00000543872 DENND4AQ7Z401 1863 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 TRBV2A0A0J9YWF9 115 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 ANKRD20A5PA0PJZ0 165 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 CDK2P24941 298 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 TEAD1P28347 426 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 NAA10P41227 235 aaPredicted RBP11.71□□□□□ -0.54
SMG8-202ENST00000543872 NPBWR1P48145 328 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 ANXA11P50995 505 aaKnown RBP11.71□□□□□ -0.54
SMG8-202ENST00000543872 RELQ04864 619 aaPredicted RBP11.71□□□□□ -0.54
SMG8-202ENST00000543872 SMCO1Q147U7 214 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 CLLU1OSQ5K130 101 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 YOD1Q5VVQ6 348 aaPredicted RBP11.71□□□□□ -0.54
SMG8-202ENST00000543872 FAM199XQ6PEV8 388 aaPredicted RBP11.71□□□□□ -0.54
SMG8-202ENST00000543872 TMED4Q7Z7H5 227 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 CAMKVQ8NCB2 501 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 DIO2Q92813 273 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 SEC22AQ96IW7 307 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 SLC22A12Q96S37 553 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 GLIPR2Q9H4G4 154 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 CWH43Q9H720 699 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 MED17Q9NVC6 651 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 ASH2LQ9UBL3 628 aa11.71□□□□□ -0.54
SMG8-202ENST00000543872 OR14I1A6ND48 311 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 WRBO00258 174 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 CTDSPLO15194 276 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 LCMT2O60294 686 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 SNAPC5O75971 98 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 PCDH8O95206 1070 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 UBBP0CG47 229 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 UBCP0CG48 685 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 EDNRAP25101 427 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 P2RY4P51582 365 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 PNLIPRP1P54315 467 aa11.7□□□□□ -0.54
SMG8-202ENST00000543872 RPS27AP62979 156 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 UBA52P62987 128 aaKnown RBP11.7□□□□□ -0.54
SMG8-202ENST00000543872 ZNF85Q03923 595 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms