RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 GGNBP1Q5YKI7 109 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 RBMS3Q6XE24 437 aaKnown RBP5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TPRA1Q86W33 373 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 GPR148Q8TDV2 347 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TECTBQ96PL2 329 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TRAF4Q9BUZ4 470 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-215ENST00000537824 C12orf10Q9HB07 376 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 ASB6Q9NWX5 421 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 DNAJC15Q9Y5T4 150 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 HS3ST4Q9Y661 456 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 A3GALT2U3KPV4 340 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM131LA2VDJ0 1609 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TUBAL3A6NHL2 446 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 FAM227AF5H4B4 570 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 M0QYG6 137 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 ZBTB7AO95365 584 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 IQCJQ1A5X6 159 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 SFRP5Q5T4F7 317 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 KCTD11Q693B1 232 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TEX261Q6UWH6 196 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 NAGSQ8N159 534 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 L3HYPDHQ96EM0 354 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 NUDT9Q9BW91 350 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 PARD6AQ9NPB6 346 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 USP22Q9UPT9 525 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 U3KQ87 197 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 SLIT3O75094 1523 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 PATJQ8NI35 1801 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM131Q92545 1883 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 A0A1W2PQ45 241 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-215ENST00000537824 A0A1W2PQY0 241 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TCF21O43680 179 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 CLCNKAP51800 687 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 KRTDAPP60985 99 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TLE4Q04727 773 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 C18orf21Q32NC0 220 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-215ENST00000537824 OR2G6Q5TZ20 316 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 PSRC1Q6PGN9 363 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-215ENST00000537824 CD300LGQ6UXG3 332 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 MAVSQ7Z434 540 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 CLDN22Q8N7P3 220 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 OR4K17Q8NGC6 315 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 KIAA1143Q96AT1 154 aaPredicted RBP5.32□□□□□ -1.56
CSMD1-215ENST00000537824 ANAPC1Q9H1A4 1944 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 A0A1W2PPH5 198 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 HIDE1A8MVS5 230 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 CBX7O95931 251 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TAS2R30P59541 319 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 FAM74A1Q5RGS3 127 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 TMIGD1Q6UXZ0 262 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 ADIPOR2Q86V24 386 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 NUP43Q8NFH3 380 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 OR6N1Q8NGY5 312 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 DTD1Q8TEA8 209 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 PCED1BQ96HM7 432 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.32□□□□□ -1.56
CSMD1-215ENST00000537824 SERINC1Q9NRX5 453 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF281Q9Y2X9 895 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 COL1A2P08123 1366 aa5.32□□□□□ -1.56
CSMD1-215ENST00000537824 EMP3P54852 163 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 C3orf38Q5JPI3 329 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TREML2Q5T2D2 321 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 AKT1S1Q96B36 256 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM18Q96B42 140 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 B3GAT2Q9NPZ5 323 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SDHAF3Q9NRP4 125 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 LYRM2Q9NU23 88 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TRAV34A0A0B4J273 112 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 LIPAP38571 399 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 OR4C15Q8NGM1 316 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 POPDC3Q9HBV1 291 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 GPR45Q9Y5Y3 372 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 LRRC37A3O60309 1634 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 NFKBIEO00221 500 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TBX18O95935 607 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 LETMD1Q6P1Q0 360 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 PODNL1Q6PEZ8 512 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 VITQ6UXI7 678 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 LRP11Q86VZ4 500 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 CPA6Q8N4T0 437 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 COMMD1Q8N668 190 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SFT2D1Q8WV19 159 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 DVL3Q92997 716 aaPredicted RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 C4orf36Q96KX1 117 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SGCZQ96LD1 299 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 MRPL17Q9NRX2 175 aaKnown RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 IER3IP1Q9Y5U9 82 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 BACE2Q9Y5Z0 518 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SMIM28A0A1B0GU29 152 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 S1PR4O95977 384 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SERPINA5P05154 406 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SERPINE2P07093 398 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 METTL15P1P0C7V9 234 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ACP5P13686 325 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 NKX3-2P78367 333 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 SLC25A46Q96AG3 418 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 TMEM19Q96HH6 336 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 MOB1AQ9H8S9 216 aa5.31□□□□□ -1.56
CSMD1-215ENST00000537824 DUS2Q9NX74 493 aaKnown RBP5.31□□□□□ -1.56
CSMD1-215ENST00000537824 ZNF629Q9UEG4 869 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms