RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 SDHDO14521 159 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 HCRTR1O43613 425 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 FAM189A1O60320 539 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 SPAG7O75391 227 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 SEC22BO75396 215 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 SCGB2A1O75556 95 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 TSPY4P0CV99 314 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 TSPY10P0CW01 314 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 POU2F1P14859 743 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 FUT1P19526 365 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 CYP2B6P20813 491 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 CCND2P30279 289 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 FGF9P31371 208 aaPredicted RBP2.28□□□□□ -2.04
CCDC7-208ENST00000537047 RABIFP47224 123 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 KLK7P49862 253 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 KPNA2P52292 529 aaKnown RBP2.28□□□□□ -2.04
CCDC7-208ENST00000537047 TGFBR3Q03167 851 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 TRIM16LQ309B1 348 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 C11orf71Q6IPW1 123 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 TMIGD1Q6UXZ0 262 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 UNC5DQ6UXZ4 953 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 ZNF571Q7Z3V5 609 aaPredicted RBP2.28□□□□□ -2.04
CCDC7-208ENST00000537047 C6orf120Q7Z4R8 191 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 OR2L8Q8NGY9 312 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 OR56B4Q8NH76 319 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 BRSK1Q8TDC3 778 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 ST8SIA1Q92185 356 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 TESK2Q96S53 571 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 VCPKMTQ9H867 229 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 CALHM2Q9HA72 323 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 KIF25Q9UIL4 384 aa2.28□□□□□ -2.04
CCDC7-208ENST00000537047 PIN4Q9Y237 131 aaKnown RBP2.28□□□□□ -2.04
CCDC7-208ENST00000537047 LRP4O75096 1905 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 FRMPD4Q14CM0 1322 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 MAP3K15Q6ZN16 1313 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 A6NIZ1 184 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 C11orf94C9JXX5 98 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 AIREO43918 545 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 TNFSF13O75888 250 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 B3GAT3O94766 335 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 LRATO95237 230 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 PGCP20142 388 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 TBXA2RP21731 343 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 SHMT2P34897 504 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 TFPI2P48307 235 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 AP3M2P53677 418 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 RAP1BP61224 184 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 EWSR1Q01844 656 aaKnown RBP eCLIP2.27□□□□□ -2.05
CCDC7-208ENST00000537047 CNTN2Q02246 1040 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 BOLA3Q53S33 107 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 PIGGQ5H8A4 983 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 KLF17Q5JT82 389 aaPredicted RBP2.27□□□□□ -2.05
CCDC7-208ENST00000537047 C1orf100Q5SVJ3 147 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 SLC25A34Q6PIV7 304 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 FTMTQ8N4E7 242 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 KIR3DL3Q8N743 410 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 ATP6V0D2Q8N8Y2 350 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 DENND6BQ8NEG7 585 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 CCDC54Q8NEL0 328 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 OR6C4Q8NGE1 309 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 OR10A7Q8NGE5 316 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 SLC35A5Q9BS91 424 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 OR11A1Q9GZK7 315 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 POLR1EQ9GZS1 481 aaKnown RBP2.27□□□□□ -2.05
CCDC7-208ENST00000537047 WDR76Q9H967 626 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 AATFQ9NY61 560 aaKnown RBP eCLIP2.27□□□□□ -2.05
CCDC7-208ENST00000537047 NINJ2Q9NZG7 142 aa2.27□□□□□ -2.05
CCDC7-208ENST00000537047 ATP10DQ9P241 1426 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 PLEKHH1Q9ULM0 1364 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 SH3TC1Q8TE82 1336 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 VSTM2BA6NLU5 285 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 G3V4G9 280 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 LGI1O95970 557 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 CA1P00915 261 aaPredicted RBP2.26□□□□□ -2.05
CCDC7-208ENST00000537047 H2BFMP0C1H6 154 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 CHTF8P0CG12 524 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 GAP43P17677 238 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 HOXA9P31269 272 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 DAP3P51398 398 aaKnown RBP2.26□□□□□ -2.05
CCDC7-208ENST00000537047 NSUN5P1Q3KNT7 163 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 CAMK2N1Q7Z7J9 78 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 KIAA1328Q86T90 577 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 ACOT1Q86TX2 421 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 STXBP6Q8NFX7 210 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 STARD8Q92502 1023 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 NDRG1Q92597 394 aaKnown RBP2.26□□□□□ -2.05
CCDC7-208ENST00000537047 CEP170P1Q96L14 293 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 C12orf66Q96MD2 445 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 ZNF641Q96N77 438 aaPredicted RBP2.26□□□□□ -2.05
CCDC7-208ENST00000537047 NAT9Q9BTE0 207 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 KRT23Q9C075 422 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 DEC1Q9P2X7 70 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 CLCA3PQ9Y6N3 262 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 ABCC9O60706 1549 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
CCDC7-208ENST00000537047 IGHV1OR21-1A0A087WYE8 117 aa2.25□□□□□ -2.05
CCDC7-208ENST00000537047 A0A1W2PNV4 684 aa2.25□□□□□ -2.05
CCDC7-208ENST00000537047 E9PBE3 544 aa2.25□□□□□ -2.05
CCDC7-208ENST00000537047 MBD3O95983 291 aa2.25□□□□□ -2.05
CCDC7-208ENST00000537047 MOSP00540 346 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms