RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 NTF4P34130 210 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 ZNF83P51522 516 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 FAM174BQ3ZCQ3 159 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 OR7E24Q6IFN5 339 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SLC22A25Q6T423 547 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CCDC103Q8IW40 242 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CNOT9Q92600 299 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 ADAD1Q96M93 576 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CCDC115Q96NT0 180 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SORT1Q99523 831 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 NUF2Q9BZD4 464 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SSU72Q9NP77 194 aaKnown RBP17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 BTNL2Q9UIR0 455 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TRAPPC4Q9Y296 219 aa17.32■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TMED7-TICAM2A0A0A6YYA0 188 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 A0A1W2PR80 420 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 PRAMEF27A3QJZ7 478 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 E7EQL1 145 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 E9PBE3 544 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TM9SF1O15321 606 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 RGS16O15492 202 aaPredicted RBP17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SSX4O60224 188 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 EIF1BO60739 113 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 DHRS4L1P0CG22 281 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CD40P25942 277 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TTKP33981 857 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 PLAURQ03405 335 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 RNF130Q86XS8 419 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CMIPQ8IY22 773 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 DEPDC4Q8N2C3 294 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TRIML2Q8N7C3 387 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SPATA3Q8NHX4 192 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 DDIT4LQ96D03 193 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 MUS81Q96NY9 551 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TRNT1Q96Q11 434 aaKnown RBP17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 DHRS9Q9BPW9 319 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 RHNO1Q9BSD3 238 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CACNG6Q9BXT2 260 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 YAE1D1Q9NRH1 226 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CBLN4Q9NTU7 201 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 HAO1Q9UJM8 370 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TMED7Q9Y3B3 224 aa17.31■□□□□ 0.36
TNFRSF1B-204ENST00000536782 AP3D1O14617 1153 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 ZNF208O43345 1280 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 ANXA11P50995 505 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 POLR2HP52434 150 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 NUDT6P53370 316 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SLC35A1P78382 337 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TXNL4AP83876 142 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 H3F3AP84243 136 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 GABRA6Q16445 453 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SYPL1Q16563 259 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CASP12Q6UXS9 341 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 FBXL14Q8N1E6 418 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 ANKFN1Q8N957 763 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 PMM1Q92871 262 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 PANX1Q96RD7 426 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 NAA11Q9BSU3 229 aaPredicted RBP17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 MEAF6Q9HAF1 191 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 PARPBPQ9NWS1 579 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 OSGIN1Q9UJX0 560 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SLC9A8Q9Y2E8 581 aa17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 HEATR1Q9H583 2144 aaKnown RBP17.3■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TMEM72A0PK05 275 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CCDC154A6NI56 674 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 AGAP5A6NIR3 686 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 M0R1B8 84 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 ERLIN1O75477 346 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 C1QCP02747 245 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 ITGA5P08648 1049 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 BGNP21810 368 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TACR3P29371 465 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 MAP2K6P52564 334 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 FOXG1P55316 489 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 NME5P56597 212 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 IRX1P78414 480 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SPOCK1Q08629 439 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 STX3Q13277 289 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 GNA13Q14344 377 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 C11orf71Q6IPW1 123 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 OGFOD2Q6N063 350 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 LRRC74BQ6ZQY2 392 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 MUC15Q8N387 334 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 OR52E4Q8NGH9 312 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SLC38A1Q9H2H9 487 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 MTHFD2LQ9H903 347 aaPredicted RBP17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 UPB1Q9UBR1 384 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 FLVCR1Q9Y5Y0 555 aa17.29■□□□□ 0.36
TNFRSF1B-204ENST00000536782 PDLIM1O00151 329 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CHRM4P08173 479 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 IMPDH2P12268 514 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 UQCRBP14927 111 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 IL7RP16871 459 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 SLC1A3P43003 542 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 FABP6P51161 128 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 DSCR9P59020 149 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 UFM1P61960 85 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 RAB35Q15286 201 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 TNFAIP8L3Q5GJ75 292 aa17.28■□□□□ 0.36
TNFRSF1B-204ENST00000536782 CEP85LQ5SZL2 805 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms