RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 PRSS50Q9UI38 385 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 PRDM4Q9UKN5 801 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 TMED7Q9Y3B3 224 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 GMEB1Q9Y692 573 aa12.45□□□□□ -0.42
SF3B2-215ENST00000534307 DSCAMO60469 2012 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 A0A096LPI6 279 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 TMEM72A0PK05 275 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 KIAA1324LA8MWY0 1029 aaPredicted RBP12.44□□□□□ -0.42
SF3B2-215ENST00000534307 RAMP1O60894 148 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 ANP32DO95626 131 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 CNOT4O95628 575 aaKnown RBP12.44□□□□□ -0.42
SF3B2-215ENST00000534307 THBS1P07996 1170 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 NUDT7P0C024 238 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 COX5AP20674 150 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 FPR1P21462 350 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 TACR3P29371 465 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 NTF4P34130 210 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 MAP2K6P52564 334 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 NR1H2P55055 460 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 AQP5P55064 265 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 ITGADQ13349 1161 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 RGNQ15493 299 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 TAB1Q15750 504 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 LIN52Q52LA3 116 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 RPS26P11Q5JNZ5 115 aaPredicted RBP12.44□□□□□ -0.42
SF3B2-215ENST00000534307 C20orf204Q6ZNR8 217 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 HDXQ7Z353 690 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 BIVMQ86UB2 503 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 WFDC8Q8IUA0 241 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF440Q8IYI8 595 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 CLIP4Q8N3C7 705 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 OR52P1PQ8NH57 321 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 STON2Q8WXE9 905 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF775Q96BV0 537 aaPredicted RBP12.44□□□□□ -0.42
SF3B2-215ENST00000534307 DNAJA3Q96EY1 480 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 PLPPR2Q96GM1 343 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 RSPO3Q9BXY4 272 aaPredicted RBP12.44□□□□□ -0.42
SF3B2-215ENST00000534307 UBTD1Q9HAC8 227 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 A4GALTQ9NPC4 353 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 TMEM45AQ9NWC5 275 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 TMEM181Q9P2C4 612 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 TRAPPC4Q9Y296 219 aa12.44□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF443Q9Y2A4 671 aaPredicted RBP12.44□□□□□ -0.42
SF3B2-215ENST00000534307 ARID1AO14497 2285 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 TRBV5-3A0A0A0MS03 114 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 A0A0G2JPF8 293 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 ZC3H12DA2A288 527 aaKnown RBP12.43□□□□□ -0.42
SF3B2-215ENST00000534307 HMGB1P1B2RPK0 211 aaPredicted RBP12.43□□□□□ -0.42
SF3B2-215ENST00000534307 HNRNPCL2B2RXH8 293 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 HNRNPCL3B7ZW38 293 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 CLIC1O00299 241 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 HNRNPCL1O60812 293 aaKnown RBP12.43□□□□□ -0.42
SF3B2-215ENST00000534307 PLAUP00749 431 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 HNRNPCL4P0DMR1 293 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 IMPDH2P12268 514 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 CCNA2P20248 432 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 IL32P24001 234 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 ATP4BP51164 291 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 STX1BP61266 288 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 FADDQ13158 208 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 PRAMEF8Q5VWM4 474 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 PRAMEF7Q5VXH5 474 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF704Q6ZNC4 412 aaPredicted RBP12.43□□□□□ -0.42
SF3B2-215ENST00000534307 GALNT5Q7Z7M9 940 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 CCDC103Q8IW40 242 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 LRRC75A-AS1Q8N1F1 130 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 C10orf111Q8N326 155 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 PIGXQ8TBF5 258 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 KISS1RQ969F8 398 aaPredicted RBP12.43□□□□□ -0.42
SF3B2-215ENST00000534307 MAL2Q969L2 176 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 PIGTQ969N2 578 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 SPDL1Q96EA4 605 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 ZHX1-C8orf76Q96EF9 292 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 USB1Q9BQ65 265 aaKnown RBP12.43□□□□□ -0.42
SF3B2-215ENST00000534307 POTEKPQ9BYX7 375 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 BCL2L10Q9HD36 194 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 ZNF446Q9NWS9 450 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 CCDC167Q9P0B6 97 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 EMC3Q9P0I2 261 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 SLAMF8Q9P0V8 285 aa12.43□□□□□ -0.42
SF3B2-215ENST00000534307 GKN3PP0CG01 181 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 PRG2P13727 222 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 UQCRBP14927 111 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 IGHV1-2P23083 117 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 IRX1P78414 480 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-215ENST00000534307 NKX6-1P78426 367 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-215ENST00000534307 ZSWIM7Q19AV6 140 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 PAGE3Q5JUK9 113 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 BHLHA15Q7RTS1 189 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-215ENST00000534307 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.42□□□□□ -0.42
SF3B2-215ENST00000534307 ATG4DQ86TL0 474 aaPredicted RBP12.42□□□□□ -0.42
SF3B2-215ENST00000534307 GOLGA6L1Q8N7Z2 621 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 CKAP2Q8WWK9 683 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 HSD17B8Q92506 261 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 DDIT4LQ96D03 193 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 CCL19Q99731 98 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 SPATA9Q9BWV2 254 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 INTS9Q9NV88 658 aaKnown RBP12.42□□□□□ -0.42
SF3B2-215ENST00000534307 VAPAQ9P0L0 249 aa12.42□□□□□ -0.42
SF3B2-215ENST00000534307 HIVEP2P31629 2446 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms