RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 SOCS6O14544 535 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 TNFRSF10CO14798 259 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 HCRTR1O43613 425 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 CTNSO60931 367 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 SMIM18P0DKX4 95 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 LIM2P55344 173 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 SYT6Q5T7P8 510 aaPredicted RBP16.31■□□□□ 0.2
PHRF1-205ENST00000533464 METTL11BQ5VVY1 283 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 TMEM53Q6P2H8 277 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 GSG1LQ6UXU4 331 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 SIMC1Q8NDZ2 872 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 NUDT22Q9BRQ3 303 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 DIMT1Q9UNQ2 313 aaKnown RBP16.31■□□□□ 0.2
PHRF1-205ENST00000533464 PCDHGA6Q9Y5G7 932 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 HS3ST3A1Q9Y663 406 aa16.31■□□□□ 0.2
PHRF1-205ENST00000533464 A0A1W2PR48 441 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 KIAA1024LP59773 190 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 TPRA1Q86W33 373 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 NMNAT3Q96T66 252 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 ALG12Q9BV10 488 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 ZNF736B4DX44 427 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-205ENST00000533464 FTCDNL1E5RQL4 147 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 GPRIN2O60269 458 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 SLC22A5O76082 557 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 FPR3P25089 353 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 PCSK6P29122 969 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 LIPAP38571 399 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 EPHA5P54756 1037 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 SLC26A5P58743 744 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 FOXK2Q01167 660 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 PRICKLE2Q7Z3G6 844 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 ZNF784Q8NCA9 323 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-205ENST00000533464 SGPP1Q9BX95 441 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 SLC6A20Q9NP91 592 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 ABRACLQ9P1F3 81 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 POLHQ9Y253 713 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 RREB1Q92766 1687 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 hCG_1807616A0A1W2PRN6 198 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 GABARAPO95166 117 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 GIFP27352 417 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 CTGFP29279 349 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 MRPS10P82664 201 aaKnown RBP16.3■□□□□ 0.2
PHRF1-205ENST00000533464 HSF5Q4G112 596 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-205ENST00000533464 KCTD20Q7Z5Y7 419 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 RABEPKQ7Z6M1 372 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 GHSRQ92847 366 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 TXNL4BQ9NX01 149 aaKnown RBP16.3■□□□□ 0.2
PHRF1-205ENST00000533464 VSX1Q9NZR4 365 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-205ENST00000533464 ZNF281Q9Y2X9 895 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 ACOD1A6NK06 481 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 TRMT12Q53H54 448 aaKnown RBP16.3■□□□□ 0.2
PHRF1-205ENST00000533464 C3orf33Q6P1S2 294 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 CCDC28AQ8IWP9 274 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 LAX1Q8IWV1 398 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 OR5D14Q8NGL3 314 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 BRIX1Q8TDN6 353 aaKnown RBP16.3■□□□□ 0.2
PHRF1-205ENST00000533464 CHRDQ9H2X0 955 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 OR51J1Q9H342 316 aa16.3■□□□□ 0.2
PHRF1-205ENST00000533464 UBE2J1Q9Y385 318 aaPredicted RBP16.3■□□□□ 0.2
PHRF1-205ENST00000533464 NSG1A0A0A6YYJ2 146 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 A0A0G2JMP0 313 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 TFP02787 698 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 MAOAP21397 527 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 TRIM23P36406 574 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 SLC19A1P41440 591 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 EEF1A1P68104 462 aaKnown RBP16.29■□□□□ 0.2
PHRF1-205ENST00000533464 SPOCK1Q08629 439 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 MLF2Q15773 248 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-205ENST00000533464 LRRC69Q6ZNQ3 347 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 OR4M2Q8NGB6 313 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 LCORQ96JN0 433 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-205ENST00000533464 NECAB3Q96P71 396 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-205ENST00000533464 ACER3Q9NUN7 267 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 SLC23A2Q9UGH3 650 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 METTL15A6NJ78 407 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 GOSR2O14653 212 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 SC5DO75845 299 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 CTSLP07711 333 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 TEAD1P28347 426 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 AFF3P51826 1226 aaKnown RBP16.29■□□□□ 0.2
PHRF1-205ENST00000533464 DUSP5Q16690 384 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 AGAP6Q5VW22 663 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 OPN5Q6U736 354 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 SLC35D2Q76EJ3 337 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 ZC3H10Q96K80 434 aaKnown RBP16.29■□□□□ 0.2
PHRF1-205ENST00000533464 AGAP4Q96P64 663 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 DAPP1Q9UN19 280 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 STRCP1A6NGW2 1772 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 OR7A10O76100 309 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 KNG1P01042 644 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 CSF1P09603 554 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 PBX4Q9BYU1 374 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 UBQLN3Q9H347 655 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 CLEC2DQ9UHP7 191 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 PTPRZ1P23471 2315 aaPredicted RBP16.29■□□□□ 0.2
PHRF1-205ENST00000533464 SSC5DA1L4H1 1573 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 TLCD2A6NGC4 264 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 SIRPAP78324 504 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 FCRLAQ7L513 359 aa16.29■□□□□ 0.2
PHRF1-205ENST00000533464 NRARPQ7Z6K4 114 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms