RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 THUMPD3Q9BV44 507 aaKnown RBP6.74□□□□□ -1.33
NXF1-215ENST00000533440 CCDC106Q9BWC9 280 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 FUT8Q9BYC5 575 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 REEP4Q9H6H4 257 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 ACSS3Q9H6R3 686 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 LPAR2Q9HBW0 351 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 G6PC2Q9NQR9 355 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 ZCCHC3Q9NUD5 404 aaKnown RBP6.74□□□□□ -1.33
NXF1-215ENST00000533440 TRAPPC4Q9Y296 219 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 SLC9A8Q9Y2E8 581 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 CCL27Q9Y4X3 112 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 SPIN1Q9Y657 262 aaPredicted RBP6.74□□□□□ -1.33
NXF1-215ENST00000533440 SAR1BQ9Y6B6 198 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 KCNE3Q9Y6H6 103 aa6.74□□□□□ -1.33
NXF1-215ENST00000533440 LOC105371242A0A075B767 164 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 ARPC4-TTLL3A0A0A6YYG9 625 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 TRAV20A0A0B4J274 112 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 ANKRD28O15084 1053 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 ZSCAN12O43309 604 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 IGKV3-15P01624 115 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 GAAP10253 952 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 TFPIP10646 304 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 NPR2P20594 1047 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 PRPH2P23942 346 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 FKBP2P26885 142 aaKnown RBP6.73□□□□□ -1.33
NXF1-215ENST00000533440 GPR6P46095 362 aaPredicted RBP6.73□□□□□ -1.33
NXF1-215ENST00000533440 SERPINB9P50453 376 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 PRKAA2P54646 552 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 LMO4P61968 165 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 IL1RL1Q01638 556 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 ZNF141Q15928 474 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 TBRG1Q3YBR2 411 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 ELFN2Q5R3F8 820 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 TEX35Q5T0J7 233 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 PDZK1Q5T2W1 519 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 FAHD2BQ6P2I3 314 aaPredicted RBP6.73□□□□□ -1.33
NXF1-215ENST00000533440 SPATA21Q7Z572 469 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 C1QL2Q7Z5L3 287 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 CARM1Q86X55 608 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 CDK20Q8IZL9 346 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 FAM169BQ8N8A8 192 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 ZIC4Q8N9L1 334 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 POMGNT2Q8NAT1 580 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 OR1K1Q8NGR3 316 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 ADAMTS15Q8TE58 950 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 TMEM45BQ96B21 275 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 PPCDCQ96CD2 204 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 DNAJA3Q96EY1 480 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 CHMP6Q96FZ7 201 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 FAHD2AQ96GK7 314 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 FCRL1Q96LA6 429 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 ANKRD27Q96NW4 1050 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 ZNF317Q96PQ6 595 aaPredicted RBP6.73□□□□□ -1.33
NXF1-215ENST00000533440 SLC6A7Q99884 636 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 ACTRT3Q9BYD9 372 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 TMPRSS13Q9BYE2 586 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 NMUR2Q9GZQ4 415 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 GSTO2Q9H4Y5 243 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 SEC61A2Q9H9S3 476 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 RRAGDQ9NQL2 400 aaPredicted RBP6.73□□□□□ -1.33
NXF1-215ENST00000533440 CTPS2Q9NRF8 586 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 GPATCH2Q9NW75 528 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 TMEM216Q9P0N5 145 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 SH3BP4Q9P0V3 963 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 TMEM181Q9P2C4 612 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 CHRNA9Q9UGM1 479 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 KCNE5Q9UJ90 142 aa6.73□□□□□ -1.33
NXF1-215ENST00000533440 SH3PXD2BA1X283 911 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 VSTM5A8MXK1 200 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 WNT9BO14905 357 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 AKAP10O43572 662 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 EIF1BO60739 113 aaKnown RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 SEC22BO75396 215 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 BCL10O95999 233 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 INHBAP08476 426 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 ADRA2AP08913 450 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 SAGP10523 405 aaPredicted RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 SDC1P18827 310 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 CDH2P19022 906 aaPredicted RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 ACHEP22303 614 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 ATP5F1P24539 256 aaPredicted RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 COL8A2P25067 703 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 PHBP35232 272 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 TMEM33P57088 247 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 OR2B6P58173 313 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 SLC9B1Q4ZJI4 515 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 AP1ARQ63HQ0 302 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 GRINAQ7Z429 371 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 ABHD12BQ7Z5M8 362 aaPredicted RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 ADGRG3Q86Y34 549 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 SLC22A9Q8IVM8 553 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 FAM71CQ8NEG0 241 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 SPATA4Q8NEY3 305 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 PSMA8Q8TAA3 256 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 MAGEE2Q8TD90 523 aaPredicted RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 CKAP2Q8WWK9 683 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 BCL2L2Q92843 193 aaPredicted RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 MTERF3Q96E29 417 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 SDF2Q99470 211 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 PAFAH2Q99487 392 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms