RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 OR1Q1Q15612 314 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 CLEC12AQ5QGZ9 265 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 THEM4Q5T1C6 240 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 AHSA2Q719I0 299 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 SLC29A4Q7RTT9 530 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 C9orf40Q8IXQ3 194 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 OR14A16Q8NHC5 309 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 PIGXQ8TBF5 258 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 DTD1Q8TEA8 209 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 ACOT11Q8WXI4 607 aaPredicted RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 GATAD2BQ8WXI9 593 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 C8orf44Q96CB5 159 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 EGLN3Q9H6Z9 239 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 ATP13A2Q9NQ11 1180 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 FLRT3Q9NZU0 649 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 ASH2LQ9UBL3 628 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 IL20RAQ9UHF4 553 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 RNF24Q9Y225 148 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 LOC390937A0A1W2PQ73 354 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 RGS13O14921 159 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 FLRT2O43155 660 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 MAN1A2O60476 641 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 CPNE3O75131 537 aaKnown RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 WBP4O75554 376 aaKnown RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 ITIH1P19827 911 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 MAPK3P27361 379 aaPredicted RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 IFNGR2P38484 337 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 PPICP45877 212 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 ATP12AP54707 1039 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 EMP2P54851 167 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 TOP3AQ13472 1001 aaPredicted RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 EBPQ15125 230 aaKnown RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 ZNF829Q3KNS6 432 aaPredicted RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 GTF2IRD2BQ6EKJ0 949 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 C16orf47Q6ZP98 133 aaPredicted RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 PTCHD4Q6ZW05 846 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 PRICKLE2Q7Z3G6 844 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 GTF2IRD2Q86UP8 949 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 CCDC103Q8IW40 242 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 PRR18Q8N4B5 295 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 ZNF454Q8N9F8 522 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 CHPT1Q8WUD6 406 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 PLEKHA8Q96JA3 519 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 LCORQ96JN0 433 aaPredicted RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 DEPDC7Q96QD5 511 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 NODALQ96S42 347 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 C12orf57Q99622 126 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 DGCR6LQ9BY27 220 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 ULBP3Q9BZM4 244 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 TP63Q9H3D4 680 aaPredicted RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 DSN1Q9H410 356 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 ZC4H2Q9NQZ6 224 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.08□□□□□ -1.28
SOX6-211ENST00000528429 ERVK-18Q9QC07 812 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 PCDHGA5Q9Y5G8 931 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 HSPE1-MOB4S4R3N1 261 aa7.08□□□□□ -1.28
SOX6-211ENST00000528429 KNTC1P50748 2209 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 SERINC4A6NH21 518 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 TAF4O00268 1085 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 SCO2O43819 266 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 ABCB7O75027 752 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 NOS1APO75052 506 aaPredicted RBP7.07□□□□□ -1.28
SOX6-211ENST00000528429 HTR1AP08908 422 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 HBQ1P09105 142 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 IL12BP29460 328 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 ALDH3B2P48448 385 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 PMS2P3Q13401 168 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 OCLNQ16625 522 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 CASP12Q6UXS9 341 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 WDR88Q6ZMY6 472 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 OVCH1Q7RTY7 1134 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 BMP8AQ7Z5Y6 402 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 LINC00471Q8N535 108 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 OR5M3Q8NGP4 307 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 OR1N1Q8NGS0 311 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 PHOSPHO1Q8TCT1 267 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 APH1BQ8WW43 257 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 NR4A3Q92570 626 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 MR1Q95460 341 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 TMEM27Q9HBJ8 222 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 DNAJB12Q9NXW2 375 aaKnown RBP7.07□□□□□ -1.28
SOX6-211ENST00000528429 ZNF226Q9NYT6 803 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 TESQ9UGI8 421 aaKnown RBP7.07□□□□□ -1.28
SOX6-211ENST00000528429 TPRKBQ9Y3C4 175 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 DMRT1Q9Y5R6 373 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 A0A1B0GWA3 101 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 ZAR1LA6NP61 321 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 HSBP1L1C9JCN9 74 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 SCDO00767 359 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 SLC25A17O43808 307 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 ALOX12BO75342 701 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 ZFP36L1Q07352 338 aaKnown RBP7.07□□□□□ -1.28
SOX6-211ENST00000528429 PLCXD2Q0VAA5 305 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 CHAF1BQ13112 559 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 ILKQ13418 452 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 ATP1A4Q13733 1029 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 FGFBP1Q14512 234 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 IL11RAQ14626 422 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 GINS1Q14691 196 aa7.07□□□□□ -1.28
SOX6-211ENST00000528429 C1orf94Q6P1W5 598 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms