RNA–Protein interactions for RNA: ENST00000528256.1

PICALM-208, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 4

Gene PICALM, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-208	ENST00000528256	GPR68	Q15743	365 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	KCTD19	Q17RG1	926 aa	Predicted RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	ADPRM	Q3LIE5	342 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	CHRFAM7A	Q494W8	412 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	EEF1A1P5	Q5VTE0	462 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	ANKRD22	Q5VYY1	191 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	TRIM40	Q6P9F5	258 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	TMIGD1	Q6UXZ0	262 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	LINGO2	Q7L985	606 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	C9orf40	Q8IXQ3	194 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	MCU	Q8NE86	351 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	OR10G3	Q8NGC4	313 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF721	Q8TF20	911 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	MAIP1	Q8WWC4	291 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	NTNG2	Q96CW9	530 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	PERP	Q96FX8	193 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	TMEM19	Q96HH6	336 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	SENP5	Q96HI0	755 aa	Predicted RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	APOPT1	Q96IL0	206 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF597	Q96LX8	424 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	KLHL15	Q96M94	604 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	SERPINB12	Q96P63	405 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	CCL19	Q99731	98 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	BAG1	Q99933	345 aa	Predicted RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	DESI2	Q9BSY9	194 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	SFXN3	Q9BWM7	321 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	RBM24	Q9BX46	236 aa	Known RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	ROGDI	Q9GZN7	287 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	NT5DC2	Q9H857	520 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	COPS7B	Q9H9Q2	264 aa	Predicted RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	CALHM2	Q9HA72	323 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	PROK2	Q9HC23	129 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	LYRM4	Q9HD34	91 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	HOMER3	Q9NSC5	361 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	4.87	□□□□□ -1.63	4e-8	■■□□□ 12
PICALM-208	ENST00000528256	PPP1R14D	Q9NXH3	145 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	C1RL	Q9NZP8	487 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	KCNS2	Q9ULS6	477 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	CAMK2A	Q9UQM7	478 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	CHCHD2	Q9Y6H1	151 aa	Predicted RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	IKBKG	Q9Y6K9	419 aa		4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	FBN1	P35555	2871 aa	Known RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	FN1	P02751	2386 aa	Known RBP	4.87	□□□□□ -1.63
PICALM-208	ENST00000528256	ANKDD1B	A6NHY2	528 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF587B	E7ETH6	402 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	GOLGA8M	H3BSY2	632 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	TRIM3	O75382	744 aa	Predicted RBP	4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	SNX4	O95219	450 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	ACSL3	O95573	720 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	FGG	P02679	453 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	IGKV3-11	P04433	115 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	HPN	P05981	417 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	CCDC175	P0C221	793 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	G6PD	P11413	515 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	PTMS	P20962	102 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	MAGEA3	P43357	314 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	RPL21	P46778	160 aa	Known RBP	4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	HNMT	P50135	292 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	CDKL1	Q00532	357 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	PLIN5	Q00G26	463 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	RUNX1T1	Q06455	604 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	RCAN2	Q14206	197 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	PPP1R3A	Q16821	1122 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	KRTAP24-1	Q3LI83	254 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	NHSL2	Q5HYW2	709 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	SBSN	Q6UWP8	590 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	SATL1	Q86VE3	508 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	FOXRED2	Q8IWF2	684 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	CNTN4	Q8IWV2	1026 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	ZPLD1	Q8TCW7	415 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	RBM18	Q96H35	190 aa	Known RBP	4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	PDLIM5	Q96HC4	596 aa	Known RBP	4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	ART5	Q96L15	291 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	ZFP3	Q96NJ6	502 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	DGAT2	Q96PD7	388 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	GAL3ST4	Q96RP7	486 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	EPYC	Q99645	322 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	EGFL8	Q99944	293 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	UGT2B28	Q9BY64	529 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	PIGM	Q9H3S5	423 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	ZNF226	Q9NYT6	803 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	FBXO9	Q9UK97	447 aa	Predicted RBP	4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	IKZF3	Q9UKT9	509 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	SLC6A5	Q9Y345	797 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	SPACA6	W5XKT8	324 aa		4.86	□□□□□ -1.63
PICALM-208	ENST00000528256	HIVEP2	P31629	2446 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	JMJD1C	Q15652	2540 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	COL6A5	A8TX70	2615 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	IQANK1	A0A1B0GTG1	560 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	CDC7	O00311	574 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	TP53I11	O14683	189 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	TSPAN4	O14817	238 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	XPNPEP2	O43895	674 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	FGF17	O60258	216 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	LMX1B	O60663	402 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	RCBTB2	O95199	551 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	LRAT	O95237	230 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	TTC4	O95801	387 aa		4.85	□□□□□ -1.63
PICALM-208	ENST00000528256	TBX6	O95947	436 aa	Predicted RBP	4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms