RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 CLEC9AQ6UXN8 241 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF621Q6ZSS3 439 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 BHLHA15Q7RTS1 189 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-212ENST00000527887 RNF130Q86XS8 419 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 PIGXQ8TBF5 258 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 AKAP1Q92667 903 aaKnown RBP eCLIP12.58□□□□□ -0.4
CAPN1-212ENST00000527887 ZG16BQ96DA0 208 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 MUCL1Q96DR8 90 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 THOC1Q96FV9 657 aaKnown RBP12.58□□□□□ -0.4
CAPN1-212ENST00000527887 PERPQ96FX8 193 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 Q96MF0 132 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 SLC38A1Q9H2H9 487 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 CTPS2Q9NRF8 586 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 TMEM45AQ9NWC5 275 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 THUMPD1Q9NXG2 353 aaKnown RBP12.58□□□□□ -0.4
CAPN1-212ENST00000527887 CALML5Q9NZT1 146 aa12.58□□□□□ -0.4
CAPN1-212ENST00000527887 NUP214P35658 2090 aaPredicted RBP12.58□□□□□ -0.4
CAPN1-212ENST00000527887 NSD1Q96L73 2696 aaPredicted RBP12.57□□□□□ -0.4
CAPN1-212ENST00000527887 PRAMEF27A3QJZ7 478 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 ERICH4A6NGS2 130 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 RFXANKO14593 260 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF208O43345 1280 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 EIF1BO60739 113 aaKnown RBP12.57□□□□□ -0.4
CAPN1-212ENST00000527887 SLC22A3O75751 556 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 DBIP07108 87 aaKnown RBP12.57□□□□□ -0.4
CAPN1-212ENST00000527887 ZCCHC18P0CG32 403 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 COX5AP20674 150 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 EPHA3P29320 983 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 IL12AP29459 219 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 RYKP34925 604 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 RASSF2P50749 326 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 SLC16A1P53985 500 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 LTBQ06643 244 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 ETFDHQ16134 617 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 PDCD4Q53EL6 469 aaKnown RBP12.57□□□□□ -0.4
CAPN1-212ENST00000527887 C1QTNF12Q5T7M4 302 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 MSANTD1Q6ZTZ1 278 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 ADGRG3Q86Y34 549 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 PEX5LQ8IYB4 626 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF440Q8IYI8 595 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF100Q8IYN0 542 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 DDIT4LQ96D03 193 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 RADILQ96JH8 1075 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 ZIM2Q9NZV7 527 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 TMEM181Q9P2C4 612 aa12.57□□□□□ -0.4
CAPN1-212ENST00000527887 ABCA2Q9BZC7 2435 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 PGM3O95394 542 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 PLAUP00749 431 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 NR2F1P10589 423 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 IL7RP16871 459 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 GGT1P19440 569 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 RPS4Y1P22090 263 aaKnown RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 PRDX6P30041 224 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 SLC1A3P43003 542 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 IDH2P48735 452 aaKnown RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 MRPL19P49406 292 aaKnown RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 ATP4BP51164 291 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 MNAT1P51948 309 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 POLR2HP52434 150 aaKnown RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 NME5P56597 212 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 RPS4XP62701 263 aaKnown RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 CAPRIN1Q14444 709 aaKnown RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 SYPL1Q16563 259 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 FBXW9Q5XUX1 488 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 OLIG3Q7RTU3 272 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 WDR60Q8WVS4 1066 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 FBXW5Q969U6 566 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 TRMT61AQ96FX7 289 aaKnown RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF300Q96RE9 604 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 EBF4Q9BQW3 602 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 NAA11Q9BSU3 229 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 WDR55Q9H6Y2 383 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 RMND5AQ9H871 391 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 PARPBPQ9NWS1 579 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 P2RX2Q9UBL9 471 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 NOSIPQ9Y314 301 aaKnown RBP12.56□□□□□ -0.4
CAPN1-212ENST00000527887 ARID1AO14497 2285 aa12.56□□□□□ -0.4
CAPN1-212ENST00000527887 ROS1P08922 2347 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 NAV3Q8IVL0 2385 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 CFAP73A6NFT4 308 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF716A6NP11 495 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 H7C1Q1 480 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 OVOL3O00110 214 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 CHRM4P08173 479 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 SLC35A1P78382 337 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 H3F3AP84243 136 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 PPA1Q15181 289 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 TSC22D1Q15714 1073 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 ZNF672Q499Z4 452 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-212ENST00000527887 SLC9B1Q4ZJI4 515 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 NXNQ6DKJ4 435 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 ANKFN1Q8N957 763 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 CNOT9Q92600 299 aaKnown RBP12.55□□□□□ -0.4
CAPN1-212ENST00000527887 GTPBP3Q969Y2 492 aaKnown RBP12.55□□□□□ -0.4
CAPN1-212ENST00000527887 APH1AQ96BI3 265 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 ARL5BQ96KC2 179 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 SMR3AQ99954 134 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 INPP5KQ9BT40 448 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 GRIP2Q9C0E4 1043 aa12.55□□□□□ -0.4
CAPN1-212ENST00000527887 PIF1Q9H611 641 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms