RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 E9PI62 339 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 LMO7DNF2Z398 122 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 OR7A10O76100 309 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 CD1AP06126 327 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 PNMTP11086 282 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 GFERP55789 205 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 OR12D2P58182 307 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 HNRNPKP61978 463 aaKnown RBP eCLIP14.07□□□□□ -0.16
USH1C-207ENST00000527720 RPS4XP62701 263 aaKnown RBP14.07□□□□□ -0.16
USH1C-207ENST00000527720 NNATQ16517 81 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 WBP2NLQ6ICG8 309 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 MZT2BQ6NZ67 158 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 LRRC28Q86X40 367 aaPredicted RBP14.07□□□□□ -0.16
USH1C-207ENST00000527720 CARFQ8N187 725 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 SDR9C7Q8NEX9 313 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 MRPL48Q96GC5 212 aaKnown RBP14.07□□□□□ -0.16
USH1C-207ENST00000527720 TMEM184BQ9Y519 407 aaPredicted RBP14.07□□□□□ -0.16
USH1C-207ENST00000527720 GON4LQ3T8J9 2241 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 MCIDASD6RGH6 385 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 OGG1O15527 345 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 IL33O95760 270 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 GYPBP06028 91 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 PPICP45877 212 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 E2F1Q01094 437 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 FNDC7Q5VTL7 733 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 SCAIQ8N9R8 606 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 ZSCAN1Q8NBB4 408 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 OR4K13Q8NH42 304 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 ENKURQ8TC29 256 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 LIPHQ8WWY8 451 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 MVB12AQ96EY5 273 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 SLC46A1Q96NT5 459 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 OR1F2PQ96R84 312 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 PHOX2BQ99453 314 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 TMEM43Q9BTV4 400 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 SPRTNQ9H040 489 aaPredicted RBP14.07□□□□□ -0.16
USH1C-207ENST00000527720 NRIP3Q9NQ35 241 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 LANCL2Q9NS86 450 aa14.07□□□□□ -0.16
USH1C-207ENST00000527720 LINC00854A0A1B0GVQ3 168 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 HMX3A6NHT5 357 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 B4DXG7 233 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 DVL2O14641 736 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 PRKAR1AP10644 381 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 SHC1P29353 583 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 RPL4P36578 427 aaKnown RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 DDOSTP39656 456 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 PPM1FP49593 454 aaPredicted RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 CSTF1Q05048 431 aaKnown RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 SLC3A1Q07837 685 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 IL10RAQ13651 578 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 PON3Q15166 354 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 P2RY14Q15391 338 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 NDUFAF6Q330K2 333 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 C14orf28Q4W4Y0 310 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 IDNKQ5T6J7 187 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 CEACAM19Q7Z692 300 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 NR2C2APQ86WQ0 139 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 LSRQ86X29 649 aaPredicted RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 OR14A16Q8NHC5 309 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 KCNJ15Q99712 375 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 CTRCQ99895 268 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 RNF121Q9H920 327 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 RBFOX1Q9NWB1 397 aaKnown RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 ST6GALNAC2Q9UJ37 374 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 MRTO4Q9UKD2 239 aaKnown RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 OR2W5A6NFC9 320 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 FAM25AB3EWG3 89 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 FAM25CB3EWG5 89 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 FAM25GB3EWG6 89 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 TMEM150CB9EJG8 249 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 PYCR1P32322 319 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 MAP2K3P46734 347 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 DIO1P49895 249 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 GBX2P52951 348 aaPredicted RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 SLC37A1P57057 533 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 SF3A2Q15428 464 aaKnown RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 CDONQ4KMG0 1287 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 SFXN4Q6P4A7 337 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 METTL27Q8N6F8 245 aaPredicted RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 DUSP18Q8NEJ0 188 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 C17orf47Q8NEP4 570 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 NLGN4YQ8NFZ3 816 aaPredicted RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 PTPMT1Q8WUK0 201 aaPredicted RBP14.06□□□□□ -0.16
USH1C-207ENST00000527720 FRMD6Q96NE9 622 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 DDOQ99489 341 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.06□□□□□ -0.16
USH1C-207ENST00000527720 CYSLTR2Q9NS75 346 aa14.06□□□□□ -0.16
USH1C-207ENST00000527720 TRAV1-2A0A0B4J238 106 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 ELOA3DA6NLF2 546 aaPredicted RBP14.05□□□□□ -0.16
USH1C-207ENST00000527720 GNB5O14775 395 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 TFP02787 698 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 UBL4AP11441 157 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 HPGDP15428 266 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 ELK1P19419 428 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 LCN1P31025 176 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 RORAP35398 523 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 THBS2P35442 1172 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 KIR2DL3P43628 341 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 HSF2Q03933 536 aa14.05□□□□□ -0.16
USH1C-207ENST00000527720 QPRTQ15274 297 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms