RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 ADAM28Q9UKQ2 775 aa3.22□□□□□ -1.89
CD44-223ENST00000526553 POLDIP2Q9Y2S7 368 aa3.22□□□□□ -1.89
CD44-223ENST00000526553 L3MBTL1Q9Y468 752 aa3.22□□□□□ -1.89
CD44-223ENST00000526553 NPTNQ9Y639 398 aa3.22□□□□□ -1.89
CD44-223ENST00000526553 RPAP1Q9BWH6 1393 aaPredicted RBP3.22□□□□□ -1.89
CD44-223ENST00000526553 PREX1Q8TCU6 1659 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 ARAP3Q8WWN8 1544 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 OR52A4PA6NMU1 304 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 E7ESA3 106 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 H3BMQ9 156 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 GOLGA8SH3BPF8 625 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 SGK1O00141 431 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 NBR2O15453 112 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 POLR2DO15514 142 aaKnown RBP3.21□□□□□ -1.9
CD44-223ENST00000526553 ZNF264O43296 627 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 PRKAB2O43741 272 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 TIMM8AO60220 97 aaPredicted RBP3.21□□□□□ -1.9
CD44-223ENST00000526553 WBP4O75554 376 aaKnown RBP3.21□□□□□ -1.9
CD44-223ENST00000526553 CABYRO75952 493 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 CLDN9O95484 217 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 SERPINA3P01011 423 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 IGHG4P01861 327 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 CCDC130P13994 396 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 ZP3P21754 424 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 MAGEA8P43361 318 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 P2RY4P51582 365 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 BEX3Q00994 111 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 C1orf61Q13536 156 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 SLC25A52Q3SY17 297 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 TIGITQ495A1 244 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 CTSL3PQ5NE16 218 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 ZNF658Q5TYW1 1059 aaPredicted RBP3.21□□□□□ -1.9
CD44-223ENST00000526553 WSCD1Q658N2 575 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 TPGS2Q68CL5 300 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 METAP1DQ6UB28 335 aaPredicted RBP3.21□□□□□ -1.9
CD44-223ENST00000526553 ZNF677Q86XU0 584 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 SLC22A9Q8IVM8 553 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 GPR65Q8IYL9 337 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 LINC01561Q8N1V8 128 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 KIR3DL3Q8N743 410 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 OR9K2Q8NGE7 335 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 OR52K2Q8NGK3 314 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 AKR7LQ8NHP1 331 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 CCDC26Q8TAB7 109 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 ADAMTS16Q8TE57 1224 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 TCTEX1D2Q8WW35 142 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 RASD2Q96D21 266 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 LINC00167Q96N53 147 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 COPS8Q99627 209 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 ANP32EQ9BTT0 268 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 TM2D1Q9BX74 207 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 RAB34Q9BZG1 259 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 MIEF1Q9NQG6 463 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 ETNK2Q9NVF9 386 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 ABCG2Q9UNQ0 655 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 AK6Q9Y3D8 172 aaKnown RBP3.21□□□□□ -1.9
CD44-223ENST00000526553 TIMM10BQ9Y5J6 103 aa3.21□□□□□ -1.9
CD44-223ENST00000526553 STRCQ7RTU9 1775 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 UGGT2Q9NYU1 1516 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 SUPT6HQ7KZ85 1726 aaKnown RBP3.2□□□□□ -1.9
CD44-223ENST00000526553 IGLV8-61A0A075B6I0 122 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 SERF1AO75920 110 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 AP2A1O95782 977 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 TOP1P11387 765 aaKnown RBP3.2□□□□□ -1.9
CD44-223ENST00000526553 SFTPCP11686 197 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 RNH1P13489 461 aaKnown RBP3.2□□□□□ -1.9
CD44-223ENST00000526553 KRTAP5-9P26371 169 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 SUCLG1P53597 346 aaKnown RBP3.2□□□□□ -1.9
CD44-223ENST00000526553 TP53I3Q53FA7 332 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 C6orf226Q5I0X4 101 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 PAGE2BQ5JRK9 111 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 PRAMEF5Q5TYX0 476 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 PRAMEF6Q5VXH4 476 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 LIPNQ5VXI9 398 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 ZNF544Q6NX49 715 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 SLC35F2Q8IXU6 374 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 MCOLN2Q8IZK6 566 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 MFSD9Q8NBP5 474 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 OR2T33Q8NG76 320 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 SLC2A14Q8TDB8 520 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 SCFD1Q8WVM8 642 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 DPH7Q9BTV6 452 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 TSSK1BQ9BXA7 367 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 SPATA16Q9BXB7 569 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 RHBGQ9H310 441 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 GLIPR2Q9H4G4 154 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 METTL7AQ9H8H3 244 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 SIGLEC8Q9NYZ4 499 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 SLC2A6Q9UGQ3 507 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 SUN2Q9UH99 717 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 PRO0461Q9UI25 63 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 PRPF19Q9UMS4 504 aaKnown RBP3.2□□□□□ -1.9
CD44-223ENST00000526553 USP16Q9Y5T5 823 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 GOLGA3Q08378 1498 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 ABCA8O94911 1581 aa3.2□□□□□ -1.9
CD44-223ENST00000526553 ABCA9Q8IUA7 1624 aa3.19□□□□□ -1.9
CD44-223ENST00000526553 RICTORQ6R327 1708 aa3.19□□□□□ -1.9
CD44-223ENST00000526553 IGKV6D-21A0A0A0MT36 114 aa3.19□□□□□ -1.9
CD44-223ENST00000526553 GOLGA8OA6NCC3 632 aa3.19□□□□□ -1.9
CD44-223ENST00000526553 ZNF716A6NP11 495 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms