RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 RAD21L1Q9H4I0 556 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 NGBQ9NPG2 151 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 ARGLU1Q9NWB6 273 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-203ENST00000525013 CCDC167Q9P0B6 97 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 TRAPPC4Q9Y296 219 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 ZNF443Q9Y2A4 671 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-203ENST00000525013 NOSIPQ9Y314 301 aaKnown RBP16.44■□□□□ 0.22
CAPN1-203ENST00000525013 DSPPQ9NZW4 1301 aa16.44■□□□□ 0.22
CAPN1-203ENST00000525013 NF1P21359 2839 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 IGKV3D-15A0A087WSY6 115 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 A0A096LPI6 279 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 A0A0G2JPF8 293 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 HMGB1P1B2RPK0 211 aaPredicted RBP16.43■□□□□ 0.22
CAPN1-203ENST00000525013 HNRNPCL2B2RXH8 293 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 HNRNPCL3B7ZW38 293 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 ZNF208O43345 1280 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 DNPH1O43598 174 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 HNRNPCL1O60812 293 aaKnown RBP16.43■□□□□ 0.22
CAPN1-203ENST00000525013 NUDT7P0C024 238 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 HNRNPCL4P0DMR1 293 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 CXCR1P25024 350 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 HOXC12P31275 282 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 COPZ1P61923 177 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 SLC35A1P78382 337 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 PDK3Q15120 406 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 RGNQ15493 299 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 STK11Q15831 433 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 BLOC1S3Q6QNY0 202 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 CLIP4Q8N3C7 705 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 MAL2Q969L2 176 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 SPDL1Q96EA4 605 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 ARMC7Q9H6L4 198 aa16.43■□□□□ 0.22
CAPN1-203ENST00000525013 ZNF469Q96JG9 3925 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-203ENST00000525013 ZC3H12DA2A288 527 aaKnown RBP16.42■□□□□ 0.22
CAPN1-203ENST00000525013 ZNF716A6NP11 495 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 C5orf58C9J3I9 102 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 GPR171O14626 319 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 IGHV3-9P01782 118 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 THBS1P07996 1170 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 NCF2P19878 526 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-203ENST00000525013 MRPL19P49406 292 aaKnown RBP16.42■□□□□ 0.22
CAPN1-203ENST00000525013 MAP2K6P52564 334 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 FADDQ13158 208 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 ZSWIM7Q19AV6 140 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 AGKQ53H12 422 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 SHEQ5VZ18 495 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 WBP2NLQ6ICG8 309 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 FUNDC1Q8IVP5 155 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 APH1AQ96BI3 265 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 USB1Q9BQ65 265 aaKnown RBP16.42■□□□□ 0.22
CAPN1-203ENST00000525013 NAA11Q9BSU3 229 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-203ENST00000525013 POTEKPQ9BYX7 375 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 ADAM19Q9H013 955 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 IFT52Q9Y366 437 aa16.42■□□□□ 0.22
CAPN1-203ENST00000525013 HEATR1Q9H583 2144 aaKnown RBP16.42■□□□□ 0.22
CAPN1-203ENST00000525013 CLOCKO15516 846 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 EIF1BO60739 113 aaKnown RBP16.41■□□□□ 0.22
CAPN1-203ENST00000525013 RAMP1O60894 148 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 IMPDH2P12268 514 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 PRG2P13727 222 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 IGHV1-2P23083 117 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 ACAA2P42765 397 aaKnown RBP16.41■□□□□ 0.22
CAPN1-203ENST00000525013 ZNF311Q5JNZ3 666 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 Q5PR19 223 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 RNF220Q5VTB9 566 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 FBXW9Q5XUX1 488 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 MUCL1Q96DR8 90 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 THOC1Q96FV9 657 aaKnown RBP16.41■□□□□ 0.22
CAPN1-203ENST00000525013 PERPQ96FX8 193 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 SPATA9Q9BWV2 254 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 ESRP2Q9H6T0 727 aaKnown RBP16.41■□□□□ 0.22
CAPN1-203ENST00000525013 VIPAS39Q9H9C1 493 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 A4GALTQ9NPC4 353 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 SLC25A37Q9NYZ2 338 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 SLAMF8Q9P0V8 285 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 RNF115Q9Y4L5 304 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 ZFHX3Q15911 3703 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 NAV3Q8IVL0 2385 aa16.41■□□□□ 0.22
CAPN1-203ENST00000525013 VPS13CQ709C8 3753 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 HS3ST1O14792 307 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 MRPL33O75394 65 aaKnown RBP16.4■□□□□ 0.22
CAPN1-203ENST00000525013 CNOT4O95628 575 aaKnown RBP16.4■□□□□ 0.22
CAPN1-203ENST00000525013 CD3EP07766 207 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 FOSL1P15407 271 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 GGT1P19440 569 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 ADSLP30566 484 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-203ENST00000525013 SLC16A1P53985 500 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 H3F3AP84243 136 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 BNIP2Q12982 314 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 PAGE3Q5JUK9 113 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 SERPINA11Q86U17 422 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 KRTAP1-3Q8IUG1 177 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 LRRC75A-AS1Q8N1F1 130 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 BBS10Q8TAM1 723 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 TMEM171Q8WVE6 324 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 AKAP1Q92667 903 aaKnown RBP eCLIP16.4■□□□□ 0.22
CAPN1-203ENST00000525013 MAGEB18Q96M61 343 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 TMEM204Q9BSN7 226 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 BCL2L10Q9HD36 194 aa16.4■□□□□ 0.22
CAPN1-203ENST00000525013 PLCE1Q9P212 2302 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms