RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 TMEM139Q8IV31 216 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 FAM9CQ8IZT9 166 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 OR4F15Q8NGB8 312 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 RNF141Q8WVD5 230 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 MRRFQ96E11 262 aaKnown RBP7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 ELP4Q96EB1 424 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 OR5B2Q96R09 309 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 QRSL1Q9H0R6 528 aaKnown RBP7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 NOL11Q9H8H0 719 aaKnown RBP7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 DYNLRB1Q9NP97 96 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 PLEK2Q9NYT0 353 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 C1RLQ9NZP8 487 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 MRTO4Q9UKD2 239 aaKnown RBP7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 NUP50Q9UKX7 468 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 ANGPTL3Q9Y5C1 460 aa7.56□□□□□ -1.2
TRAPPC9-212ENST00000521944 A0A1B0GUS0 222 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 PPP6CO00743 305 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 PAX4O43316 350 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 KCNK2O95069 426 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 NKX2-2O95096 273 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 IPO7O95373 1038 aaKnown RBP7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 PDYNP01213 254 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 IGHV2-5P01817 119 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 CHN1P15882 459 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 CDH2P19022 906 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 MPGP29372 298 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 SLC7A1P30825 629 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 MPIP34949 423 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 SELENBP1Q13228 472 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 FASTKD3Q14CZ7 662 aaKnown RBP7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 ZNF311Q5JNZ3 666 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 AVPI1Q5T686 147 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 GALNT18Q6P9A2 607 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 WFDC3Q8IUB2 231 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 CEP70Q8NHQ1 597 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 MAIP1Q8WWC4 291 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 MAGOHBQ96A72 148 aaKnown RBP7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 GPR22Q99680 433 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 GATA5Q9BWX5 397 aaPredicted RBP7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 ASPNQ9BXN1 380 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 MRPL37Q9BZE1 423 aaKnown RBP7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 NELFAQ9H3P2 528 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 GLIPR2Q9H4G4 154 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 BEX1Q9HBH7 125 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 MMP26Q9NRE1 261 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 UBQLN4Q9NRR5 601 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 EMC3Q9P0I2 261 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 CARD8Q9Y2G2 431 aa7.55□□□□□ -1.2
TRAPPC9-212ENST00000521944 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 IGHV2OR16-5A0A0B4J2B6 119 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 MDFIC2A0A1B0GVS7 189 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 A0A1W2PQD3 144 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 CLPSL1A2RUU4 121 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 ZNF503-AS2A6NEH8 195 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 TRIM49D1C9J1S8 452 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 TP73O15350 636 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 KCNH1O95259 989 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 ESRRBO95718 433 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 NGFP01138 241 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 IGKV3-15P01624 115 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 GSNP06396 782 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 ACP2P11117 423 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 IMPDH2P12268 514 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 STMN1P16949 149 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 JUNBP17275 347 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 GATA3P23771 443 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 ALDH3B1P43353 468 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 NCBP2P52298 156 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 ALDH18A1P54886 795 aaKnown RBP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 SLC12A2P55011 1212 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 RAG2P55895 527 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 MRPS11P82912 194 aaKnown RBP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 H3F3AP84243 136 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 MVKQ03426 396 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 COL10A1Q03692 680 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 HLXQ14774 488 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 TBRG1Q3YBR2 411 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 KLHL26Q53HC5 615 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 CCNJQ5T5M9 372 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 RUSC1-AS1Q66K80 236 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 IKBIPQ70UQ0 350 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 CMC1Q7Z7K0 106 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 LRP11Q86VZ4 500 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 MISPQ8IVT2 679 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 WDFY1Q8IWB7 410 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 SAMD14Q8IZD0 417 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 CENPLQ8N0S6 344 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 ZIC4Q8N9L1 334 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 FBXO30Q8TB52 745 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 GPR151Q8TDV0 419 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 C16orf78Q8WTQ4 265 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 BCL2L2Q92843 193 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 KTI12Q96EK9 354 aaPredicted RBP7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 DNAJA3Q96EY1 480 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 GIMAP5Q96F15 307 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 ARL5BQ96KC2 179 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 AMDHD1Q96NU7 426 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 ANKRD27Q96NW4 1050 aa7.54□□□□□ -1.2
TRAPPC9-212ENST00000521944 GPA33Q99795 319 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms