RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 CXorf56Q9H5V9 222 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 ARMC7Q9H6L4 198 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 TMEM181Q9P2C4 612 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 ING1Q9UK53 422 aaPredicted RBP9.37□□□□□ -0.91
SPIDR-205ENST00000518060 ZNF232Q9UNY5 417 aa9.37□□□□□ -0.91
SPIDR-205ENST00000518060 ZC3H12DA2A288 527 aaKnown RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 MRPL33O75394 65 aaKnown RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 NUDT7P0C024 238 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 ZCCHC18P0CG32 403 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 FOSL1P15407 271 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 GGT1P19440 569 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 RPS4Y1P22090 263 aaKnown RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 IGHV1-2P23083 117 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 HOXC12P31275 282 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 IDUAP35475 653 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 PTH2RP49190 550 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 CLK1P49759 484 aaKnown RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 IDH3AP50213 366 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 PPA1Q15181 289 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 OR7A5Q15622 319 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 TTMPQ5BVD1 217 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 C9orf135Q5VTT2 229 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 ADAM5Q6NVV9 412 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 Q71RC1 249 aaPredicted RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 ATG4DQ86TL0 474 aaPredicted RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 GPAT4Q86UL3 456 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 KBTBD8Q8NFY9 601 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 MAL2Q969L2 176 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 GTPBP3Q969Y2 492 aaKnown RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 THOC1Q96FV9 657 aaKnown RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 C18orf12Q96KH6 178 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 Q96MF0 132 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 EBF4Q9BQW3 602 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 TAPBPLQ9BX59 468 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 ARGLU1Q9NWB6 273 aaPredicted RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 ADPRHL2Q9NX46 363 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 THUMPD1Q9NXG2 353 aaKnown RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 CCDC167Q9P0B6 97 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.36□□□□□ -0.91
SPIDR-205ENST00000518060 LAMP3Q9UQV4 416 aa9.36□□□□□ -0.91
SPIDR-205ENST00000518060 IGKV3D-15A0A087WSY6 115 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 A0A096LPI6 279 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 A0A0G2JPF8 293 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 CDHR4A6H8M9 788 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 ZNF716A6NP11 495 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 HNRNPCL2B2RXH8 293 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 HNRNPCL3B7ZW38 293 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 H7C1Q1 480 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 CLIC1O00299 241 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 ZNF208O43345 1280 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 FRS3O43559 492 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 DNPH1O43598 174 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 EIF1BO60739 113 aaKnown RBP9.35□□□□□ -0.91
SPIDR-205ENST00000518060 HNRNPCL1O60812 293 aaKnown RBP9.35□□□□□ -0.91
SPIDR-205ENST00000518060 RAMP1O60894 148 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 TGDSO95455 350 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 INHBBP09529 407 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 TFPTP0C1Z6 253 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 HNRNPCL4P0DMR1 293 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 MVDP53602 400 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 ATP5J2P56134 94 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 RPS4XP62701 263 aaKnown RBP9.35□□□□□ -0.91
SPIDR-205ENST00000518060 BSPH1Q075Z2 132 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 FAPQ12884 760 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 BNIP2Q12982 314 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 CEACAM7Q14002 265 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 PDK3Q15120 406 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 RGNQ15493 299 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 MAPK11Q15759 364 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 AGKQ53H12 422 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 ZNF311Q5JNZ3 666 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 OTUD3Q5T2D3 398 aaPredicted RBP9.35□□□□□ -0.91
SPIDR-205ENST00000518060 GCNT6Q5T4J0 391 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 FBXW9Q5XUX1 488 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 WBP2NLQ6ICG8 309 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 HDXQ7Z353 690 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 KRTAP1-3Q8IUG1 177 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 LRRC75A-AS1Q8N1F1 130 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 CLIP4Q8N3C7 705 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 OR52N5Q8NH56 324 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 BBS10Q8TAM1 723 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 RNF217Q8TC41 542 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 GTF2H4Q92759 462 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 PMM1Q92871 262 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 FBXW5Q969U6 566 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 SPDL1Q96EA4 605 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 SMR3AQ99954 134 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 USB1Q9BQ65 265 aaKnown RBP9.35□□□□□ -0.91
SPIDR-205ENST00000518060 CCDC28BQ9BUN5 200 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 PAIP1Q9H074 479 aaKnown RBP9.35□□□□□ -0.91
SPIDR-205ENST00000518060 DLL4Q9NR61 685 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 INTS9Q9NV88 658 aaKnown RBP9.35□□□□□ -0.91
SPIDR-205ENST00000518060 ASB6Q9NWX5 421 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 UPB1Q9UBR1 384 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 RPS6KB2Q9UBS0 482 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 POU2F3Q9UKI9 436 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 SLC9A8Q9Y2E8 581 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 PCDHB14Q9Y5E9 798 aa9.35□□□□□ -0.91
SPIDR-205ENST00000518060 ROS1P08922 2347 aa9.34□□□□□ -0.91
SPIDR-205ENST00000518060 DSPPQ9NZW4 1301 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms