RNA–Protein interactions for RNA: ENST00000516328.1

RNU6-1338P-201, Transcript of RNA, U6 small nuclear 1338, pseudogene, humanhuman

BASIC

Gene RNU6-1338P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1338P-201ENST00000516328 EWSR1Q01844 656 aaKnown RBP eCLIP0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 RGS1Q08116 209 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 CDC20Q12834 499 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 TIGITQ495A1 244 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 HECTD3Q5T447 861 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 TMEM184AQ6ZMB5 413 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 LINC00696Q6ZRV3 163 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 PAQR7Q86WK9 346 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 RIMKLAQ8IXN7 391 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 ZNF679Q8IYX0 411 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 SVOPLQ8N434 492 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 GMCL1P1Q8NEA9 526 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 OR4F15Q8NGB8 312 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 OR10G3Q8NGC4 313 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 RNF139Q8WU17 664 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 RNF5Q99942 180 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 P2RY13Q9BPV8 354 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 NACA2Q9H009 215 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 ZFP14Q9HCL3 533 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 TM9SF3Q9HD45 589 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 BCAP29Q9UHQ4 241 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 ZNF490Q9ULM2 529 aaPredicted RBP0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 LIPT1Q9Y234 373 aa0.36□□□□□ -2.35
RNU6-1338P-201ENST00000516328 SGK1O00141 431 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 MBTPS2O43462 519 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 STX6O43752 255 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 GNA14O95837 355 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 WARSP23381 471 aaKnown RBP0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 CNN1P51911 297 aaKnown RBP0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 STX1BP61266 288 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 ESRRGP62508 458 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 NUCB1Q02818 461 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 LAGE3Q14657 143 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 KIAA0087Q14695 138 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 TYSND1Q2T9J0 566 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 AARDQ4LEZ3 155 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 UNC45BQ8IWX7 931 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 LGI3Q8N145 548 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 OR8H2Q8N162 312 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 TMEM104Q8NE00 496 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 OR56B4Q8NH76 319 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 CNIH3Q8TBE1 160 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 M1APQ8TC57 530 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 CD300LFQ8TDQ1 290 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 RTN4IP1Q8WWV3 396 aaPredicted RBP0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 UPRTQ96BW1 309 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 TM4SF19Q96DZ7 209 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 DNAJC1Q96KC8 554 aaKnown RBP0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 C20orf85Q9H1P6 137 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 ZNF385DQ9H6B1 395 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 SIAEQ9HAT2 523 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 TRPV5Q9NQA5 729 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 FAM153AQ9UHL3 310 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 CYTH4Q9UIA0 394 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 FBXW2Q9UKT8 454 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 STX8Q9UNK0 236 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 TRAF3IP3Q9Y228 551 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 SLC25A15Q9Y619 301 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 PTPRTO14522 1441 aa0.35□□□□□ -2.35
RNU6-1338P-201ENST00000516328 LAMB2P55268 1798 aa0.34□□□□□ -2.35
RNU6-1338P-201ENST00000516328 GPATCH8Q9UKJ3 1502 aaKnown RBP0.34□□□□□ -2.35
RNU6-1338P-201ENST00000516328 SMIM30A4D0T7 59 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 FAM74A7A6NL05 159 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 INS-IGF2F8WCM5 200 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 LGALS9O00182 355 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 PEX7O00628 323 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 FIBPO43427 364 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 IGLV6-57P01721 117 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 GSTT2P0CG29 244 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 GSTT2BP0CG30 244 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 CXCR2P25025 360 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 TNFSF9P41273 254 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 ATXN3P54252 364 aaPredicted RBP0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 RAP1AP62834 184 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 REG3AQ06141 175 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 BFSP1Q12934 665 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 HFEQ30201 348 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 FAM74A3Q4VXF1 159 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 FAM47EQ6ZV65 393 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 VPS36Q86VN1 386 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 SERPINA12Q8IW75 414 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 LINC01561Q8N1V8 128 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 ACTRT1Q8TDG2 376 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 NAT9Q9BTE0 207 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 DEFB127Q9H1M4 99 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 HOMER3Q9NSC5 361 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 C1orf123Q9NWV4 160 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 SIGLEC9Q9Y336 463 aa0.34□□□□□ -2.36
RNU6-1338P-201ENST00000516328 SVILO95425 2214 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 IGKV1D-8A0A087WSZ0 117 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 IGHV1OR21-1A0A087WYE8 117 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 A0A0U1RRA0 63 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 TMEM223A0PJW6 202 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 PRSS37A4D1T9 235 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 WASHC1A8K0Z3 465 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 E9PMD0 336 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 H0Y626 953 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 SGK494L7N484 410 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 NDUFA7O95182 113 aa0.33□□□□□ -2.36
RNU6-1338P-201ENST00000516328 CLUP10909 449 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms