RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 POLR3GO15318 223 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-215ENST00000515516 BCHEP06276 602 aa12.09□□□□□ -0.47
TCOF1-215ENST00000515516 NCF2P19878 526 aaPredicted RBP12.09□□□□□ -0.47
TCOF1-215ENST00000515516 RPS4Y1P22090 263 aaKnown RBP12.09□□□□□ -0.47
TCOF1-215ENST00000515516 RPS4XP62701 263 aaKnown RBP12.09□□□□□ -0.47
TCOF1-215ENST00000515516 EPS8Q12929 822 aa12.09□□□□□ -0.47
TCOF1-215ENST00000515516 TIMM23BQ5SRD1 257 aa12.09□□□□□ -0.47
TCOF1-215ENST00000515516 ADAM5Q6NVV9 412 aa12.09□□□□□ -0.47
TCOF1-215ENST00000515516 EPGNQ6UW88 154 aa12.09□□□□□ -0.47
TCOF1-215ENST00000515516 MAVSQ7Z434 540 aa12.09□□□□□ -0.47
TCOF1-215ENST00000515516 FBXW5Q969U6 566 aa12.09□□□□□ -0.47
TCOF1-215ENST00000515516 PARPBPQ9NWS1 579 aa12.09□□□□□ -0.47
TCOF1-215ENST00000515516 ASB6Q9NWX5 421 aa12.09□□□□□ -0.47
TCOF1-215ENST00000515516 LAMP3Q9UQV4 416 aa12.09□□□□□ -0.47
TCOF1-215ENST00000515516 HRNRQ86YZ3 2850 aaPredicted RBP12.08□□□□□ -0.47
TCOF1-215ENST00000515516 C2CD3Q4AC94 2353 aa12.08□□□□□ -0.47
TCOF1-215ENST00000515516 A0A0G2JPF8 293 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 ZNF716A6NP11 495 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 HNRNPCL2B2RXH8 293 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 HNRNPCL3B7ZW38 293 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 H7C1Q1 480 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 SMAD7O15105 426 aaKnown RBP12.08□□□□□ -0.48
TCOF1-215ENST00000515516 HNRNPCL1O60812 293 aaKnown RBP12.08□□□□□ -0.48
TCOF1-215ENST00000515516 TGDSO95455 350 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 IGHV3-9P01782 118 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 TFPTP0C1Z6 253 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 HNRNPCL4P0DMR1 293 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 IGHV1-2P23083 117 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 IDUAP35475 653 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 SLC16A1P53985 500 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 ATP5J2P56134 94 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 BSPH1Q075Z2 132 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 WBP2NLQ6ICG8 309 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 CASP12Q6UXS9 341 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 VRK2Q86Y07 508 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 CCDC103Q8IW40 242 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 CADM2Q8N3J6 435 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 GOLGA6L1Q8N7Z2 621 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 OR9I1Q8NGQ6 314 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 SLC38A5Q8WUX1 472 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 DYDC1Q8WWB3 177 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 GTPBP3Q969Y2 492 aaKnown RBP12.08□□□□□ -0.48
TCOF1-215ENST00000515516 VPS33AQ96AX1 596 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 TRMT61AQ96FX7 289 aaKnown RBP12.08□□□□□ -0.48
TCOF1-215ENST00000515516 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 C7orf26Q96N11 449 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 SMR3AQ99954 134 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 TCF7L2Q9NQB0 619 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 SLC6A13Q9NSD5 602 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 RLIMQ9NVW2 624 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 UPB1Q9UBR1 384 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 SLC9A8Q9Y2E8 581 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 IFT52Q9Y366 437 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 MTORP42345 2549 aa12.08□□□□□ -0.48
TCOF1-215ENST00000515516 A0A1W2PP18 115 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 CDHR4A6H8M9 788 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 OR5H1A6NKK0 313 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 C5orf58C9J3I9 102 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 ADAM11O75078 769 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 RAD51DO75771 328 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 GPIP06744 558 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 THBS1P07996 1170 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 GKN3PP0CG01 181 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 PAX1P15863 534 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 COX5AP20674 150 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 PLAURQ03405 335 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 LTBQ06643 244 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 FAPQ12884 760 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 KRTAP21-3Q3LHN1 58 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 ZNF672Q499Z4 452 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-215ENST00000515516 RNF220Q5VTB9 566 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 OR7E24Q6IFN5 339 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 PAQR6Q6TCH4 344 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 KLHL17Q6TDP4 642 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 ZNF836Q6ZNA1 936 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 Q71RC1 249 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-215ENST00000515516 ZNF433Q8N7K0 673 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-215ENST00000515516 SMAP2Q8WU79 429 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-215ENST00000515516 AURKBQ96GD4 344 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-215ENST00000515516 TMEM19Q96HH6 336 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 RADILQ96JH8 1075 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 TAPBPLQ9BX59 468 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 ADAM19Q9H013 955 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 ALG2Q9H553 416 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 ZNF701Q9NV72 531 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-215ENST00000515516 FAIMQ9NVQ4 179 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 TAS2R16Q9NYV7 291 aa12.07□□□□□ -0.48
TCOF1-215ENST00000515516 ZNF443Q9Y2A4 671 aaPredicted RBP12.07□□□□□ -0.48
TCOF1-215ENST00000515516 DPRXA6NFQ7 191 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 CLIC1O00299 241 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 PGM3O95394 542 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 IMPDH2P12268 514 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 EDNRAP25101 427 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 MVDP53602 400 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 H3F3AP84243 136 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 TGFBR3Q03167 851 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 FADDQ13158 208 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 CEACAM7Q14002 265 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 RGNQ15493 299 aa12.06□□□□□ -0.48
TCOF1-215ENST00000515516 OR7A5Q15622 319 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms