RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 ZC3HAV1Q7Z2W4 902 aaKnown RBP21.72■■□□□ 1.07
SNF8-213ENST00000514929 TGIF2LYQ8IUE0 185 aa21.72■■□□□ 1.07
SNF8-213ENST00000514929 CLIP4Q8N3C7 705 aa21.72■■□□□ 1.07
SNF8-213ENST00000514929 CADM2Q8N3J6 435 aa21.72■■□□□ 1.07
SNF8-213ENST00000514929 SPATA9Q9BWV2 254 aa21.72■■□□□ 1.07
SNF8-213ENST00000514929 ADAM19Q9H013 955 aa21.72■■□□□ 1.07
SNF8-213ENST00000514929 RABEP2Q9H5N1 569 aa21.72■■□□□ 1.07
SNF8-213ENST00000514929 BCL2L10Q9HD36 194 aa21.72■■□□□ 1.07
SNF8-213ENST00000514929 BEX4Q9NWD9 120 aaPredicted RBP21.72■■□□□ 1.07
SNF8-213ENST00000514929 SLAMF8Q9P0V8 285 aa21.72■■□□□ 1.07
SNF8-213ENST00000514929 MED13LQ71F56 2210 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 IGKV3D-15A0A087WSY6 115 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 ZNF716A6NP11 495 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 CD99P14209 185 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 NCF2P19878 526 aaPredicted RBP21.71■■□□□ 1.07
SNF8-213ENST00000514929 FPR1P21462 350 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 PPIBP23284 216 aaKnown RBP21.71■■□□□ 1.07
SNF8-213ENST00000514929 NR1H2P55055 460 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 SLC35A1P78382 337 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 ACKR1Q16570 336 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 ZNF311Q5JNZ3 666 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 PRAMEF8Q5VWM4 474 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 PRAMEF7Q5VXH5 474 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 WBP2NLQ6ICG8 309 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 MSRB3Q8IXL7 192 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 BBS10Q8TAM1 723 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 PLPPR2Q96GM1 343 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 SLC52A3Q9NQ40 469 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 DCTN4Q9UJW0 460 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 PRDM4Q9UKN5 801 aa21.71■■□□□ 1.07
SNF8-213ENST00000514929 NOSIPQ9Y314 301 aaKnown RBP21.71■■□□□ 1.07
SNF8-213ENST00000514929 GPR171O14626 319 aa21.7■■□□□ 1.06
SNF8-213ENST00000514929 EIF1BO60739 113 aaKnown RBP21.7■■□□□ 1.06
SNF8-213ENST00000514929 SASH3O75995 380 aa21.7■■□□□ 1.06
SNF8-213ENST00000514929 EDNRAP25101 427 aa21.7■■□□□ 1.06
SNF8-213ENST00000514929 ACAA2P42765 397 aaKnown RBP21.7■■□□□ 1.06
SNF8-213ENST00000514929 GCNT6Q5T4J0 391 aa21.7■■□□□ 1.06
SNF8-213ENST00000514929 LSRQ86X29 649 aaPredicted RBP21.7■■□□□ 1.06
SNF8-213ENST00000514929 CCDC103Q8IW40 242 aa21.7■■□□□ 1.06
SNF8-213ENST00000514929 STON2Q8WXE9 905 aa21.7■■□□□ 1.06
SNF8-213ENST00000514929 USB1Q9BQ65 265 aaKnown RBP21.7■■□□□ 1.06
SNF8-213ENST00000514929 NAA11Q9BSU3 229 aaPredicted RBP21.7■■□□□ 1.06
SNF8-213ENST00000514929 NPHS2Q9NP85 383 aa21.7■■□□□ 1.06
SNF8-213ENST00000514929 VAPAQ9P0L0 249 aa21.7■■□□□ 1.06
SNF8-213ENST00000514929 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.7■■□□□ 1.06
SNF8-213ENST00000514929 A0A1W2PP18 115 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 ZC3H12DA2A288 527 aaKnown RBP21.69■■□□□ 1.06
SNF8-213ENST00000514929 EDF1O60869 148 aaKnown RBP21.69■■□□□ 1.06
SNF8-213ENST00000514929 PGM3O95394 542 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 IMPDH2P12268 514 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 PRG2P13727 222 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 BHLHA15Q7RTS1 189 aaPredicted RBP21.69■■□□□ 1.06
SNF8-213ENST00000514929 SERPINA11Q86U17 422 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 NFKBIDQ8NI38 313 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 HSD17B8Q92506 261 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 PIGTQ969N2 578 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 TMUB1Q9BVT8 246 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 NGBQ9NPG2 151 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 TRIM33Q9UPN9 1127 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 CHST2Q9Y4C5 530 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 FREM1Q5H8C1 2179 aa21.69■■□□□ 1.06
SNF8-213ENST00000514929 MAP1AP78559 2803 aaPredicted RBP21.68■■□□□ 1.06
SNF8-213ENST00000514929 EVPLLA8MZ36 301 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 RAMP1O60894 148 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 LYZL6O75951 148 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 CNOT4O95628 575 aaKnown RBP21.68■■□□□ 1.06
SNF8-213ENST00000514929 ARAFP10398 606 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 IDUAP35475 653 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 SLC16A1P53985 500 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 ADAM8P78325 824 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 H3F3AP84243 136 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 CAPRIN1Q14444 709 aaKnown RBP21.68■■□□□ 1.06
SNF8-213ENST00000514929 TAB1Q15750 504 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 ZNF704Q6ZNC4 412 aaPredicted RBP21.68■■□□□ 1.06
SNF8-213ENST00000514929 C20orf204Q6ZNR8 217 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 UBE2J2Q8N2K1 259 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 APH1AQ96BI3 265 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 CCL19Q99731 98 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 POTEKPQ9BYX7 375 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 CORO2BQ9UQ03 480 aa21.68■■□□□ 1.06
SNF8-213ENST00000514929 TRBV5-3A0A0A0MS03 114 aa21.67■■□□□ 1.06
SNF8-213ENST00000514929 ETS2P15036 469 aa21.67■■□□□ 1.06
SNF8-213ENST00000514929 STK11Q15831 433 aa21.67■■□□□ 1.06
SNF8-213ENST00000514929 A0A0G2JND7 137 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 FRS3O43559 492 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 SMPD2O60906 423 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 MRPL33O75394 65 aaKnown RBP21.66■■□□□ 1.06
SNF8-213ENST00000514929 PLAUP00749 431 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 IGHV3-9P01782 118 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 GPIP06744 558 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 IGHV1-2P23083 117 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 NKX6-1P78426 367 aaPredicted RBP21.66■■□□□ 1.06
SNF8-213ENST00000514929 CDK6Q00534 326 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 FOXD4Q12950 439 aaPredicted RBP21.66■■□□□ 1.06
SNF8-213ENST00000514929 BNIP2Q12982 314 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 CEACAM7Q14002 265 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 FBXW9Q5XUX1 488 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 REEP3Q6NUK4 255 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 PAQR6Q6TCH4 344 aa21.66■■□□□ 1.06
SNF8-213ENST00000514929 KRT73Q86Y46 540 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms