RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 CTTNBP2Q8WZ74 1663 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 NAIPQ13075 1403 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 A0A1B0GTQ1 180 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 TUBAL3A6NHL2 446 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 ANKRD30BLA7E2S9 258 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 E9PMD0 336 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 SGK494L7N484 410 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 DNALI1O14645 258 aaPredicted RBP3.72□□□□□ -1.81
CHD1-209ENST00000512844 IMPA2O14732 288 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 SMC2O95347 1197 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 LGI1O95970 557 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 JCHAINP01591 159 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 OPN1LWP04000 364 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 ANXA4P09525 319 aaPredicted RBP3.72□□□□□ -1.81
CHD1-209ENST00000512844 DBTP11182 482 aaKnown RBP3.72□□□□□ -1.81
CHD1-209ENST00000512844 U2AF2P26368 475 aaKnown RBP eCLIP3.72□□□□□ -1.811e-6■■■■□ 25.1
CHD1-209ENST00000512844 AKT2P31751 481 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 CDH5P33151 784 aaPredicted RBP3.72□□□□□ -1.81
CHD1-209ENST00000512844 NAPAP54920 295 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 CBX1P83916 185 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 OC90Q02509 493 aaPredicted RBP3.72□□□□□ -1.81
CHD1-209ENST00000512844 PRR4Q16378 134 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 FAM83EQ2M2I3 478 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 EXOC3L2Q2M3D2 409 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 KLHL40Q2TBA0 621 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 LIN9Q5TKA1 542 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 ZNF57Q68EA5 555 aaPredicted RBP3.72□□□□□ -1.81
CHD1-209ENST00000512844 OR8G2PQ6IF36 304 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 UFSP1Q6NVU6 142 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 C6orf89Q6UWU4 347 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 FRA10AC1Q70Z53 315 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 KRT222Q8N1A0 295 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 BPIFB2Q8N4F0 458 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 OR10H4Q8NGA5 316 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 OR9K2Q8NGE7 335 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 OR2T3Q8NH03 318 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 ADAMTS16Q8TE57 1224 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 GIPC3Q8TF64 312 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 DDI1Q8WTU0 396 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 MITD1Q8WV92 249 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 FRAT1Q92837 279 aaPredicted RBP3.72□□□□□ -1.81
CHD1-209ENST00000512844 LRRC45Q96CN5 670 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 TMEM80Q96HE8 168 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 TSNARE1Q96NA8 513 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 SH3GL1Q99961 368 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 METTL7AQ9H8H3 244 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 ISG20L2Q9H9L3 353 aaKnown RBP3.72□□□□□ -1.81
CHD1-209ENST00000512844 NEK6Q9HC98 313 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 AGPAT3Q9NRZ7 376 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 RNF14Q9UBS8 474 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 CD300AQ9UGN4 299 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 IL20RAQ9UHF4 553 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 C15orf41Q9Y2V0 281 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 PPIAL4AQ9Y536 164 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 ABCA5Q8WWZ7 1642 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 ROCK1Q13464 1354 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 TCOF1Q13428 1488 aaKnown RBP3.72□□□□□ -1.81
CHD1-209ENST00000512844 PLEKHH2Q8IVE3 1493 aa3.72□□□□□ -1.81
CHD1-209ENST00000512844 SF3B1O75533 1304 aaKnown RBP eCLIP3.71□□□□□ -1.812e-6■■■■■ 89.1
CHD1-209ENST00000512844 FHOD3Q2V2M9 1422 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 ABCA10Q8WWZ4 1543 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 A0A1B0GUL7 405 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 HEATR9A2RTY3 570 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 MBLAC1A4D2B0 266 aaPredicted RBP3.71□□□□□ -1.82
CHD1-209ENST00000512844 OR52A4PA6NMU1 304 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 TCP11X1B4DZS4 312 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 H0YL77 283 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 TRDMT1O14717 391 aaKnown RBP3.71□□□□□ -1.82
CHD1-209ENST00000512844 TM9SF1O15321 606 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 EMC8O43402 210 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 IGHV3-23P01764 117 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 CD55P08174 381 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 MSR1P21757 451 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 GABRR1P24046 479 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 DPP4P27487 766 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 MAGEA8P43361 318 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 CDKN1BP46527 198 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 YWHAGP61981 247 aaKnown RBP eCLIP3.71□□□□□ -1.82
CHD1-209ENST00000512844 CHRNA6Q15825 494 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 NKAIN1Q4KMZ8 207 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 C8orf74Q6P047 294 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 ZNF100Q8IYN0 542 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 CEND1Q8N111 149 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 ZSCAN4Q8NAM6 433 aaPredicted RBP3.71□□□□□ -1.82
CHD1-209ENST00000512844 SPATA4Q8NEY3 305 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 BPIFCQ8NFQ6 507 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 CLHC1Q8NHS4 586 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 FAM81AQ8TBF8 368 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 RAB3IL1Q8TBN0 382 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 PAQR8Q8TEZ7 354 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 IL1F10Q8WWZ1 152 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 PSMG2Q969U7 264 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 C18orf25Q96B23 403 aaPredicted RBP3.71□□□□□ -1.82
CHD1-209ENST00000512844 FGGYQ96C11 551 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 SLC25A36Q96CQ1 311 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 HAVCR1Q96D42 359 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 SDSLQ96GA7 329 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 SMIM14Q96QK8 99 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 NICN1Q9BSH3 213 aa3.71□□□□□ -1.82
CHD1-209ENST00000512844 NSRP1Q9H0G5 558 aaKnown RBP3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms