RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 KCNJ16Q9NPI9 418 aa13.96□□□□□ -0.17
SH3TC1-220ENST00000511002 DCAF13Q9NV06 445 aaKnown RBP13.96□□□□□ -0.17
SH3TC1-220ENST00000511002 ACTR3BQ9P1U1 418 aa13.96□□□□□ -0.17
SH3TC1-220ENST00000511002 OSGIN1Q9UJX0 560 aa13.96□□□□□ -0.17
SH3TC1-220ENST00000511002 SLC9A8Q9Y2E8 581 aa13.96□□□□□ -0.17
SH3TC1-220ENST00000511002 AP4B1Q9Y6B7 739 aa13.96□□□□□ -0.17
SH3TC1-220ENST00000511002 TMED7-TICAM2A0A0A6YYA0 188 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 CPSF4LA6NMK7 179 aaKnown RBP13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 PRKD3O94806 890 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 CPN1P15169 458 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 SFTPDP35247 375 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 POLR2HP52434 150 aaKnown RBP13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 KRTAP10-9P60411 292 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 RAC1P63000 192 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 GABPB1Q06547 395 aaPredicted RBP13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 TRIM25Q14258 630 aaKnown RBP13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 OR1Q1Q15612 314 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 IFI44LQ53G44 452 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 LCN8Q6JVE9 175 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 C3orf33Q6P1S2 294 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 DEF8Q6ZN54 512 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 ADGRG3Q86Y34 549 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 LSMEM1Q8N8F7 131 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 MCUR1Q96AQ8 359 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 ASB9Q96DX5 294 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 TRIM2Q9C040 744 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 RPS6KB2Q9UBS0 482 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 RPS6KA6Q9UK32 745 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 SAMD4AQ9UPU9 718 aaKnown RBP13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 TMED7Q9Y3B3 224 aa13.95□□□□□ -0.18
SH3TC1-220ENST00000511002 ABCA12Q86UK0 2595 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 TMEM72A0PK05 275 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 MBD3L4A6NDZ8 208 aaPredicted RBP13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 MBD3L3A6NE82 208 aaPredicted RBP13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 MBD3L5A6NJ08 208 aaPredicted RBP13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 CD8B2A6NJW9 211 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 CLCA1A8K7I4 914 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 EIF1AYO14602 144 aaKnown RBP13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 ACOT8O14734 319 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 FMO6PO60774 539 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 TIMP3P35625 211 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 APOBEC1P41238 236 aaKnown RBP13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 HTR3AP46098 478 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 FOXF2Q12947 444 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 BCL2A1Q16548 175 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 CTU2Q2VPK5 515 aaKnown RBP13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 ENTPD8Q5MY95 495 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 FKBP9P1Q75LS8 142 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 ASRGL1Q7L266 308 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 GDF7Q7Z4P5 450 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 ADGRE4PQ86SQ3 457 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 ATG4DQ86TL0 474 aaPredicted RBP13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 DHFR2Q86XF0 187 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 MEIOBQ8N635 442 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 MBD3L2Q8NHZ7 208 aaPredicted RBP13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 GEMIN6Q8WXD5 167 aaKnown RBP13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 ADGRG7Q96K78 797 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 KLHL15Q96M94 604 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 OR11A1Q9GZK7 315 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 MUC13Q9H3R2 512 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 CHRNA9Q9UGM1 479 aa13.94□□□□□ -0.18
SH3TC1-220ENST00000511002 A0A0B4J2E0 115 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 A0A0J9YW62 118 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 A0A1B0GX12 115 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 TCRBV5S2A0A599 114 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 HSPB2A8KAH6 182 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 TNFSF11O14788 317 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 THY1P04216 161 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 PTNP21246 168 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 BMP5P22003 454 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 CDH12P55289 794 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 HSPB2Q16082 182 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 TMEM176BQ3YBM2 270 aaPredicted RBP13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 ALG10BQ5I7T1 473 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 DMRTC2Q8IXT2 367 aaPredicted RBP13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 ZPLD1Q8TCW7 415 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 DNAJA3Q96EY1 480 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 ZNF845Q96IR2 970 aaPredicted RBP13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 AMBRA1Q9C0C7 1298 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 COQ10BQ9H8M1 238 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 TMEM27Q9HBJ8 222 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 SERINC1Q9NRX5 453 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 CLCF1Q9UBD9 225 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 SLC7A8Q9UHI5 535 aa13.93□□□□□ -0.18
SH3TC1-220ENST00000511002 TEX15Q9BXT5 2789 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 A0A1W2PNR3 127 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 ZC3H12DA2A288 527 aaKnown RBP13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 LYPD3O95274 346 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 TGM6O95932 706 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 SEMG1P04279 462 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 IFNW1P05000 195 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 TFPIP10646 304 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 CXCR1P25024 350 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 YAP1P46937 504 aaKnown RBP13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 SLC25A35Q3KQZ1 300 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 SYT14P1Q58G82 188 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 ZNF613Q6PF04 617 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 ULK3Q6PHR2 472 aa13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 TSEN54Q7Z6J9 526 aaKnown RBP13.92□□□□□ -0.18
SH3TC1-220ENST00000511002 GCNT2Q8N0V5 402 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms