RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 ACP5P13686 325 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 FKBP2P26885 142 aaKnown RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 GDF5P43026 501 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 HBA1P69905 142 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 SNTB1Q13884 538 aaKnown RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 PPP1R3BQ86XI6 285 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 IQCF1Q8N6M8 205 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 KIAA1958Q8N8K9 716 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 CUTCQ9NTM9 273 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 GAR1Q9NY12 217 aaKnown RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 ADORA3P0DMS8 318 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 PRDX3P30048 256 aaKnown RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 ZNF133P52736 654 aaPredicted RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 CLDN6P56747 220 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 SLC35D3Q5M8T2 416 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 LETMD1Q6P1Q0 360 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 GABARAPL3Q9BY60 117 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 TIAM2Q8IVF5 1701 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 CBY3A6NI87 242 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 BRINP1O60477 761 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 PSMB3P49720 205 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 C9orf131Q5VYM1 1079 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 SFXN4Q6P4A7 337 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 TMPRSS7Q7RTY8 843 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 FAM185AQ8N0U4 392 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 MOCOSQ96EN8 888 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 TMEM19Q96HH6 336 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 NCOR1O75376 2440 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 CTXN2P0C2S0 81 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 PGGHGQ32M88 737 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 NAA40Q86UY6 237 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 OR1S2Q8NGQ3 325 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 NAT1P18440 290 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 RNF111Q6ZNA4 994 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 VRK3Q8IV63 474 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 LHFPL5Q8TAF8 219 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 WASP42768 502 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 LTBQ06643 244 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 PRSS35Q8N3Z0 413 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 FAM160A2Q8N612 972 aaPredicted RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 OR6S1Q8NH40 331 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 RIMBP3CA6NJZ7 1639 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 RIMBP3BA6NNM3 1639 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 RIMBP3Q9UFD9 1639 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 GRXCR1A8MXD5 290 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 CSNK1DP48730 415 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 ZNF620Q6ZNG0 422 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 COX15Q7KZN9 410 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 FRZBQ92765 325 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 SERINC2Q96SA4 455 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 NKX3-1Q99801 234 aaPredicted RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 C11orf54Q9H0W9 315 aaPredicted RBP7.85□□□□□ -1.15
HTT-208ENST00000510626 NIT2Q9NQR4 276 aa7.85□□□□□ -1.15
HTT-208ENST00000510626 CTRB1P17538 263 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 PTAFRP25105 342 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 LCN6P62502 163 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 CXADRP78310 365 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 CTRB2Q6GPI1 263 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 ACOT7LQ6ZUV0 252 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 MDGA2Q7Z553 956 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 TECPR1Q7Z6L1 1165 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 RAB13P51153 203 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 ZNF140P52738 457 aaPredicted RBP7.84□□□□□ -1.15
HTT-208ENST00000510626 OVCH1Q7RTY7 1134 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 FBXO27Q8NI29 283 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 TOGARAM1Q9Y4F4 1720 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 TMEM72A0PK05 275 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 TRABD2BA6NFA1 517 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 FOXD2O60548 495 aaPredicted RBP7.84□□□□□ -1.15
HTT-208ENST00000510626 NCR1O76036 304 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 SERPINA5P05154 406 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 FABP1P07148 127 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 BCKDHBP21953 392 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 CYB5R2Q6BCY4 276 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 FAHD2BQ6P2I3 314 aaPredicted RBP7.84□□□□□ -1.15
HTT-208ENST00000510626 IL17RDQ8NFM7 739 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 FAHD2AQ96GK7 314 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 C4orf36Q96KX1 117 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 AHRP35869 848 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 SIRPAP78324 504 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 GCNT2Q8N0V5 402 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 OR52H1Q8NGJ2 320 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 OR9A2Q8NGT5 310 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 SLC17A5Q9NRA2 495 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 B4DEV8 164 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 KHNYNO15037 678 aaKnown RBP7.84□□□□□ -1.15
HTT-208ENST00000510626 IGHG1P01857 330 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 SEC61A1P61619 476 aaKnown RBP7.84□□□□□ -1.15
HTT-208ENST00000510626 MGAT3Q09327 533 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 PPP1R8Q12972 351 aaKnown RBP7.84□□□□□ -1.15
HTT-208ENST00000510626 CLEC14AQ86T13 490 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 CSNK1A1LQ8N752 337 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 KCNJ15Q99712 375 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 FBRSL1Q9HCM7 1045 aaKnown RBP7.84□□□□□ -1.15
HTT-208ENST00000510626 OTOFQ9HC10 1997 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 HMSDA8MTL9 139 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 PTHLHP12272 177 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 EPHA4P54764 986 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 ARSIQ5FYB1 569 aa7.84□□□□□ -1.15
HTT-208ENST00000510626 SHDQ96IW2 340 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms