RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 MOKQ9UQ07 419 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 YIPF1Q9Y548 306 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 OR1A2Q9Y585 309 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 B3GALT1Q9Y5Z6 326 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 LTN1O94822 1766 aa6.84□□□□□ -1.31
UBE2D3-224ENST00000508474 A6NIZ1 184 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 LEUTXA8MZ59 168 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 TMX2-CTNND1H3BSU7 103 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 SYT5O00445 386 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 SERPINA5P05154 406 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 HOXB5P09067 269 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 FBXO45P0C2W1 286 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 ZNF8P17098 575 aaPredicted RBP6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 FUT1P19526 365 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 SLC19A1P41440 591 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 ACTR1BP42025 376 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 SRP9P49458 86 aaKnown RBP6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 BLKP51451 505 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 ACTR1AP61163 376 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 RAP1BP61224 184 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 RAB31Q13636 194 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 PDE7AQ13946 482 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 PDGFRLQ15198 375 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 ENTPD8Q5MY95 495 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 FAM111BQ6SJ93 734 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 MRPL10Q7Z7H8 261 aaKnown RBP6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 LIX1LQ8IVB5 337 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 KIAA1958Q8N8K9 716 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 SDR9C7Q8NEX9 313 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 OR4K15Q8NH41 348 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 ADAMTS18Q8TE60 1221 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 MIB2Q96AX9 1013 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 PTCHD1Q96NR3 888 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 OPALINQ96PE5 141 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 PCYT2Q99447 389 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 VPS25Q9BRG1 176 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 BOCQ9BWV1 1114 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 SORBS1Q9BX66 1292 aaKnown RBP6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 EGLN3Q9H6Z9 239 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 PLEKHA3Q9HB20 300 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 A4GALTQ9NPC4 353 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 STEAP1Q9UHE8 339 aa6.84□□□□□ -1.32
UBE2D3-224ENST00000508474 LRRC37A3O60309 1634 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 CPED1A4D0V7 1026 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 GATCO43716 136 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 JTBO76095 146 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 STK17BO94768 372 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 LIPCP11150 499 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 CTRB1P17538 263 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 FPR3P25089 353 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 HOXA1P49639 335 aaPredicted RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 ZNF84P51523 738 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 HBA1P69905 142 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 EIF2B1Q14232 305 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 CTRB2Q6GPI1 263 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 C1orf94Q6P1W5 598 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 FAHD1Q6P587 224 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 ZC3H14Q6PJT7 736 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 SBSNQ6UWP8 590 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 SH3RF2Q8TEC5 729 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 TOMM40LQ969M1 308 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 KATNB1Q9BVA0 655 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 KCNS2Q9ULS6 477 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 ANTXRLA6NF34 631 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 ZAR1LA6NP61 321 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 FOXE1O00358 373 aaPredicted RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 LILRB5O75023 590 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 IL5P05113 134 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 C5AR1P21730 350 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 SPINT3P49223 89 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 SUOXP51687 545 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 EPHA5P54756 1037 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 RPP30P78346 268 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 SLC14A1Q13336 389 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 KIAA0319Q5VV43 1072 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 MBOAT2Q6ZWT7 520 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 P4HA3Q7Z4N8 544 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 L3MBTL4Q8NA19 623 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 OR5M8Q8NGP6 311 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 OLIG1Q8TAK6 271 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 TBC1D20Q96BZ9 403 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 GPR78Q96P69 363 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 DKKL1Q9UK85 242 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 ZNF337Q9Y3M9 751 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 CFAP20Q9Y6A4 193 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 BAZ2AQ9UIF9 1905 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 IGKV6D-21A0A0A0MT36 114 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 KDM4FA0A1W2PPD8 638 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 MTMR11A4FU01 709 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 RTCAO00442 366 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 MSTNO14793 375 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 BCL2L11O43521 198 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 PRICKLE3O43900 615 aaPredicted RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 SERPINA7P05543 415 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 ANXA7P20073 488 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 FGF7P21781 194 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 XCR1P46094 333 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 SLC9A3R2Q15599 337 aa6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 ZNF239Q16600 458 aaKnown RBP6.83□□□□□ -1.32
UBE2D3-224ENST00000508474 ZNF792Q3KQV3 632 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms