RNA–Protein interactions for RNA: ENST00000506622.5

SEC24D-208, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 2

Gene SEC24D, Length 1,319 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-208ENST00000506622 ARFGEF3Q5TH69 2177 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 WDR91A4D1P6 747 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 ITM2AO43736 263 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 TYROBPO43914 113 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 GPRIN2O60269 458 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 EIF1BO60739 113 aaKnown RBP12.8□□□□□ -0.36
SEC24D-208ENST00000506622 SCN2BO60939 215 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 BCAS1O75363 584 aaPredicted RBP12.8□□□□□ -0.36
SEC24D-208ENST00000506622 NTF4P34130 210 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 ETV4P43268 484 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 SLC35A1P78382 337 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 SAXO2Q658L1 398 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 C11orf71Q6IPW1 123 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 HMGN2P46Q86SG4 172 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 ZNF781Q8N8C0 355 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 OR10H5Q8NGA6 315 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 PMM1Q92871 262 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 TESCQ96BS2 214 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 DDIT4LQ96D03 193 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 NEURL3Q96EH8 262 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 TNFRSF13CQ96RJ3 184 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 NAA11Q9BSU3 229 aaPredicted RBP12.8□□□□□ -0.36
SEC24D-208ENST00000506622 INPP5KQ9BT40 448 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 C1QTNF6Q9BXI9 259 aa12.8□□□□□ -0.36
SEC24D-208ENST00000506622 TMED7-TICAM2A0A0A6YYA0 188 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 CLDN24A6NM45 220 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 SNUPNO95149 360 aaKnown RBP12.79□□□□□ -0.36
SEC24D-208ENST00000506622 SERPINE1P05121 402 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 POLR2HP52434 150 aaKnown RBP12.79□□□□□ -0.36
SEC24D-208ENST00000506622 CLNS1AP54105 237 aaKnown RBP12.79□□□□□ -0.36
SEC24D-208ENST00000506622 ABCE1P61221 599 aaKnown RBP12.79□□□□□ -0.36
SEC24D-208ENST00000506622 PHC1P78364 1004 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 H3F3AP84243 136 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 TGFBR3Q03167 851 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 CHRNB3Q05901 458 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 SPOCK1Q08629 439 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 FUT5Q11128 374 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 GNA13Q14344 377 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 CASP8Q14790 479 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 CHI3L2Q15782 390 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 DPY19L1Q2PZI1 675 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 TMEM249Q2WGJ8 235 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 C6orf52Q5T4I8 152 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 ZNF544Q6NX49 715 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 CASP12Q6UXS9 341 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 CMIPQ8IY22 773 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 OR52E4Q8NGH9 312 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 TMEM158Q8WZ71 300 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 CNOT9Q92600 299 aaKnown RBP12.79□□□□□ -0.36
SEC24D-208ENST00000506622 TRIM44Q96DX7 344 aaPredicted RBP12.79□□□□□ -0.36
SEC24D-208ENST00000506622 PKNOX2Q96KN3 472 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 SLC35A5Q9BS91 424 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 FKRPQ9H9S5 495 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 SLC9A8Q9Y2E8 581 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.79□□□□□ -0.36
SEC24D-208ENST00000506622 TMED7Q9Y3B3 224 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 RAP2CQ9Y3L5 183 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 ATP23Q9Y6H3 246 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 PMF1-BGLAPU3KQ54 211 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 MALRD1Q5VYJ5 2156 aa12.79□□□□□ -0.36
SEC24D-208ENST00000506622 ELOA3DA6NLF2 546 aaPredicted RBP12.78□□□□□ -0.36
SEC24D-208ENST00000506622 HMGN4O00479 90 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 ZNF208O43345 1280 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 ITGA5P08648 1049 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 UQCRBP14927 111 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 SLC25A16P16260 332 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 S100A3P33764 101 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 RPL14P50914 215 aaKnown RBP12.78□□□□□ -0.36
SEC24D-208ENST00000506622 ANXA11P50995 505 aaKnown RBP12.78□□□□□ -0.36
SEC24D-208ENST00000506622 MAP2K6P52564 334 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 FOXG1P55316 489 aaPredicted RBP12.78□□□□□ -0.36
SEC24D-208ENST00000506622 LOXL1Q08397 574 aaPredicted RBP12.78□□□□□ -0.36
SEC24D-208ENST00000506622 ELOA3BQ3SY89 546 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 SPANXN4Q5MJ08 99 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 C9orf135Q5VTT2 229 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 KIRREL3Q8IZU9 778 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 C17orf78Q8N4C9 275 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 TRIML2Q8N7C3 387 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 C1orf162Q8NEQ5 155 aaPredicted RBP12.78□□□□□ -0.36
SEC24D-208ENST00000506622 ELOA3Q8NG57 546 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 FAM168AQ92567 244 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 HTRA1Q92743 480 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 TRNT1Q96Q11 434 aaKnown RBP12.78□□□□□ -0.36
SEC24D-208ENST00000506622 KCNK17Q96T54 332 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 DCTN4Q9UJW0 460 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 CDC42EP3Q9UKI2 254 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 AMDHD2Q9Y303 409 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 FLVCR1Q9Y5Y0 555 aa12.78□□□□□ -0.36
SEC24D-208ENST00000506622 PRAMEF27A3QJZ7 478 aa12.77□□□□□ -0.37
SEC24D-208ENST00000506622 E9PBE3 544 aa12.77□□□□□ -0.37
SEC24D-208ENST00000506622 H7C417 338 aa12.77□□□□□ -0.37
SEC24D-208ENST00000506622 PDLIM1O00151 329 aa12.77□□□□□ -0.37
SEC24D-208ENST00000506622 AP3D1O14617 1153 aa12.77□□□□□ -0.37
SEC24D-208ENST00000506622 BIRC5O15392 142 aa12.77□□□□□ -0.37
SEC24D-208ENST00000506622 IL7RP16871 459 aa12.77□□□□□ -0.37
SEC24D-208ENST00000506622 LBPP18428 481 aa12.77□□□□□ -0.37
SEC24D-208ENST00000506622 TACR3P29371 465 aa12.77□□□□□ -0.37
SEC24D-208ENST00000506622 APOBEC3AP31941 199 aaPredicted RBP12.77□□□□□ -0.37
SEC24D-208ENST00000506622 SLC1A3P43003 542 aa12.77□□□□□ -0.37
SEC24D-208ENST00000506622 SLC1A6P48664 564 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms