RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ACSM5Q6NUN0 579 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 ADAM5Q6NVV9 412 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 KCNIP4Q6PIL6 250 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 DOK6Q6PKX4 331 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 Q6ZPB1 254 aaPredicted RBP2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 TAS2R42Q7RTR8 314 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 APTXQ7Z2E3 356 aaKnown RBP2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 DEFB128Q7Z7B8 93 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 ZNF329Q86UD4 541 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 VSTM4Q8IW00 320 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 OR10A7Q8NGE5 316 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 M1APQ8TC57 530 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 MIPOL1Q8TD10 442 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 PIGCQ92535 297 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 COQ2Q96H96 371 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 C12orf66Q96MD2 445 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 GLT1D1Q96MS3 346 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 AMDHD1Q96NU7 426 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 PSMB7Q99436 277 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 NPAS2Q99743 824 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 TUBGCP2Q9BSJ2 902 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 GON7Q9BXV9 100 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 DUSP16Q9BY84 665 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 KRTAP1-5Q9BYS1 174 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 HEXA-AS1Q9H8Q6 139 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 FN3KRPQ9HA64 309 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 MEPEQ9NQ76 525 aaPredicted RBP2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 HOXC10Q9NYD6 342 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 RCOR3Q9P2K3 495 aaPredicted RBP2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 CTNNA3Q9UI47 895 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 NAALAD2Q9Y3Q0 740 aa2.59□□□□□ -1.99
TRAPPC11-205ENST00000506426 CACNA1FO60840 1977 aa2.59□□□□□ -2
TRAPPC11-205ENST00000506426 FRMPD4Q14CM0 1322 aa2.59□□□□□ -2
TRAPPC11-205ENST00000506426 DOCK3Q8IZD9 2030 aa2.59□□□□□ -2
TRAPPC11-205ENST00000506426 FOCADQ5VW36 1801 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 MYO5AQ9Y4I1 1855 aaKnown RBP2.58□□□□□ -2
TRAPPC11-205ENST00000506426 IGKV6D-41A0A0C4DH26 115 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 HSFX4A0A1B0GTS1 333 aaPredicted RBP2.58□□□□□ -2
TRAPPC11-205ENST00000506426 FAM240BA0A1B0GVZ2 78 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 HSFX3A0A1B0GWH4 333 aaPredicted RBP2.58□□□□□ -2
TRAPPC11-205ENST00000506426 XKRY2A2RUG3 117 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 EPM2AB3EWF7 344 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 MSH4O15457 936 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 SLC25A27O95847 323 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 F10P00742 488 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 TIMP1P01033 207 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 HSMCR30P0CW71 290 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 HOXB6P17509 224 aaKnown RBP2.58□□□□□ -2
TRAPPC11-205ENST00000506426 CAPN2P17655 700 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 IGFBP5P24593 272 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 LAP3P28838 519 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 TAGLN2P37802 199 aaKnown RBP2.58□□□□□ -2
TRAPPC11-205ENST00000506426 ETV5P41161 510 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 PAX8Q06710 450 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 PUDPQ08623 228 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 CD300CQ08708 224 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 RIPPLY1Q0D2K3 151 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 COX10Q12887 443 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 CRMP1Q14194 572 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 KLHL22Q53GT1 634 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 TEX44Q53QW1 395 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 FAHD2BQ6P2I3 314 aaPredicted RBP2.58□□□□□ -2
TRAPPC11-205ENST00000506426 CCDC80Q76M96 950 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 NLRP9Q7RTR0 991 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 MOB3BQ86TA1 216 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 CDH26Q8IXH8 852 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 TMEM123Q8N131 208 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 LRRC75A-AS1Q8N1F1 130 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 ABHD12Q8N2K0 398 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 C15orf54Q8N8G6 183 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 Q8N9G6 341 aaPredicted RBP2.58□□□□□ -2
TRAPPC11-205ENST00000506426 CSNK1G2-AS1Q8NCQ2 148 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 OR56B2PQ8NGI1 322 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 OR4D5Q8NGN0 318 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 RNF139Q8WU17 664 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 TFB1MQ8WVM0 346 aaKnown RBP2.58□□□□□ -2
TRAPPC11-205ENST00000506426 ARNTL2Q8WYA1 636 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 FBXO32Q969P5 355 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 FAHD2AQ96GK7 314 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 TPD52L3Q96J77 140 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 C18orf12Q96KH6 178 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 RBM14Q96PK6 669 aaKnown RBP2.58□□□□□ -2
TRAPPC11-205ENST00000506426 OR5B2Q96R09 309 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 ANP32EQ9BTT0 268 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 NXF5Q9H1B4 397 aaKnown RBP2.58□□□□□ -2
TRAPPC11-205ENST00000506426 SLC38A10Q9HBR0 1119 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 TM9SF3Q9HD45 589 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 UFSP2Q9NUQ7 469 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 NMRK1Q9NWW6 199 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 EHFQ9NZC4 300 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 SENP1Q9P0U3 644 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 PCSK1NQ9UHG2 260 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 ZNF221Q9UK13 617 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 CDH9Q9ULB4 789 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 DDX19BQ9UMR2 479 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 OARD1Q9Y530 152 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 ALG6Q9Y672 507 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 PLIN4Q96Q06 1357 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 RLFQ13129 1914 aa2.58□□□□□ -2
TRAPPC11-205ENST00000506426 CHD7Q9P2D1 2997 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms